Solanum pennellii: 107005549
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Entry
107005549 CDS
T04130
Name
(RefSeq) probable galacturonosyltransferase 6 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
spen
Solanum pennellii
Pathway
spen00520
Amino sugar and nucleotide sugar metabolism
spen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
107005549
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
spen01003
]
107005549
Enzymes [BR:
spen01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
107005549
Glycosyltransferases [BR:
spen01003
]
Polysaccharide
Structural polysaccharide
107005549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
107005549
NCBI-ProteinID:
XP_015059660
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Position
12:3658016..3664557
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AA seq
595 aa
AA seq
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MRLFRRCTRISILCLLAISVFTPVFLLSFRLKNLNTDASKDFVEDLSILKHRIDAQANSA
VQQEEVEGLKGPHLVVYRDGDHGSLVSLDENDRRHKAEDVNLLQSNGTSYGGEEKNQRNL
SEQKVSPSREKGCEKSKPEGVQHSRSIQSHLRRPLDEKVKEMKDKVIRAKAYLSFAPPDS
NSHFVKEIKLRIKELERAMGDVTKDSGLSRRATQKMKAMDGTLLKASRIYPDCSAMVNTL
RAMMYNAEEQLRSQRDRTSFLVQLAARTTPKGLHCLSMRLTTEYFDLQPEEREFPNQHKL
QDPNLYHFAVFSDNVLACSVVVNSTVSTAKDPEKIVFHIVTDSLNLPAMSMWFLMNPPGK
ATIQIQSIDGFELLSIKYNEDQQKQKGLDPRYVSALNHLRFYLPDIFPSVNKIVFLDHDV
VVRKDLTRLWHINIKGKVNGAVETCVEGEPSFRRMDMFINFTDPSVATRFDANTCTWAYG
MNVFDLQEWRKRNLTALYHKYLELGSKRRLVKAGSLPLGWMTFYKHTHALDRTWHLLGLG
YDSGVTRAQIEQAAVIHYDGVMKPWLDIGIQKYKSYWNRHVSYEHPYLQQCNLHE
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaggctatttcgacgatgtacgaggatttctatcctctgtttgcttgctatttcagta
ttcactcctgttttcttgctttcatttaggctcaaaaaccttaacactgatgcatctaaa
gactttgttgaagacttatcgattcttaagcatagaatagacgctcaggcgaatagtgca
gttcaacaggaagaagttgaaggcctaaaaggaccacacctggttgtatatagagatgga
gatcatggctctttagtcagcttggatgagaatgataggcgtcacaaagcagaggatgtt
aacttattacaaagcaatgggacctcatatggtggagaagaaaaaaatcaacgaaatcta
tctgagcagaaagtgtccccatctagagaaaagggttgtgagaagtccaaaccagaaggg
gttcaacatagtcggagcatacagtcacatctgcgaaggccattagatgagaaggtaaaa
gagatgaaagataaggtgataagggccaaagcgtacttgagttttgcaccaccagatagc
aactctcattttgtgaaagagataaagctacgaattaaagagctagaacgagcaatgggt
gacgttactaaagattctggtttgtcaaggagggccacacaaaagatgaaagccatggat
gggaccctgctgaaagcaagcagaatataccctgattgctcagctatggtgaatacacta
cgtgccatgatgtataatgctgaagaacaacttcgatcacaaagggatcgaacttccttc
ctcgtacagctcgctgcaagaactacaccaaaaggccttcattgcctttccatgcggttg
accacagaatattttgatctgcagcctgaggagcgggagtttcctaaccaacacaaactg
caggatcccaatctctatcactttgctgttttctcagacaatgttttggcatgttctgtg
gttgtcaattcaactgtttcaaccgctaaggatccagagaaaattgtctttcatatagtg
actgattctctcaacctgccagcgatgtcgatgtggttcttgatgaatcctcctggaaaa
gctaccattcaaatccagagcatagacggttttgaattgttatcaatcaaatacaatgag
gatcagcagaaacaaaaaggcctcgatccaagatatgtttctgcgctgaatcacttacgt
ttttatcttcctgatatttttccttctgtgaacaagattgtgttcctcgaccatgatgtg
gttgtgcgaaaagatctaaccagactttggcacatcaacattaagggcaaagtgaatggt
gcagttgagacttgtgtggaaggtgagccttcattccgccgaatggatatgttcatcaat
ttcacagacccctcggtggcaacaaggttcgatgcaaacacatgcacttgggcatatggg
atgaatgtatttgatctgcaggagtggaggaagcgaaacttaactgctctctatcacaag
tacttggagctgggaagtaagagacgattagtgaaagctggtagtttaccacttggttgg
atgacattttacaaacacactcatgctctggacaggacatggcatcttctcgggttgggg
tatgactcgggtgtcacacgagcacaaatcgagcaggcagctgtgattcattatgatgga
gttatgaaaccatggttagacattggtatccaaaagtacaagtcctattggaacagacat
gttagctatgaacatccatatctgcaacaatgtaatttacatgagtag
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