Solanum pennellii: 107005574
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Entry
107005574 CDS
T04130
Name
(RefSeq) tRNAse Z TRZ4, mitochondrial-like isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spen03016
]
107005574
Enzymes [BR:
spen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
107005574
Transfer RNA biogenesis [BR:
spen03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
107005574
Prokaryotic type
107005574
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GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
FCD
Motif
Other DBs
NCBI-GeneID:
107005574
NCBI-ProteinID:
XP_015059694
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All DBs
Position
12:58829076..58835599
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AA seq
828 aa
AA seq
DB search
MGKKRKRRAEGNDSNDKPKKNPLPEEDELKKTGNNKSYIQILGNGMDTQDTSPSVLLFLD
KWRFLFNAGEGLQRFLTEHKITLSQIDHIFLSRVCSETVGGLPGLLLTLAGMGKEGMSVH
VSGPPDLYLLVKAMESFISNSAMGQIDSVLRNGSDEVASASSSKFDRLFAPITDGVVKLS
AVLVPPCCLKVCGSMKEGSSEPNTPLISGSHLAEDLQAQWMNLTAEVALNPGELSVVYIC
ELPEIKGKFYPDKAAALGVEPGPKYGQLQRGNSVESDHQNIIVHPCDVMEPSTHGPIVLL
VDCPTPSHLQELSSLQSLTPFYSNISGQPVEMCKKVNCLIHLSPVSVTNTPAYEQWMARF
GEAQHIMARHEPKNIEIPILKSSSRIAATLNYLCPQLFPSPGFWSLQQLKSLPSISKFPR
ELSRPTSCQITYAENLLKFHLLPYKELGLDNSNVPATISRTEILNELTSNIPEIISASEH
ISQLWHGNNGIVEELQLHETPLPSCLEGITREDMEIVFLGTGSSQPSKYRNVSSIFINLF
LKGSILLDCGEGTLGQLKRRFGVEGADEAVKGLKCIWISHIHADHHAGVARILALRHDLL
SGSPHEPLIVVGPRQLEIFLDRYQMLEELDMQFLDCRDTTESSWEAFESNDDNDANGSTC
RLKNLLRQAGLMTLISVPVIHCPQAFGIVLKFADRTNVIGKKIPGWKIVYSGDTRPCPEL
VKASREATLLIHEATFEDGMLEEAIAKNHSTMGEAIEAGDAAGAYRVILTHFSQRYPKIP
VFDGTYMHKACIAFDLMSVNLADLPILPSVVPYLKLLFPDEMSINEAN
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagaggaaaagaagggctgagggtaatgatagtaatgacaagccgaagaaa
aaccctctaccggaagaagacgagctcaaaaaaactggtaataacaagtcatatatacag
atcctaggaaatggcatggatactcaagatacatcaccctctgtcctcctctttttggac
aaatggaggtttttatttaacgcgggagaaggattgcaacgcttcttgacagagcataaa
attacattgtcacagattgatcacatatttctatcacgtgtctgctcagaaactgttggt
gggctcccaggtctcctattgactttggctgggatgggaaaagaagggatgtcagtacat
gtatcgggtcctccggatctttatctattggttaaagcaatggaatcattcatctcaaat
tctgccatgggtcaaatagatagtgttctccgtaatggatcagatgaagttgctagcgct
tcttcaagtaagtttgatcgtctttttgctccgattactgatggagttgtcaaactatcg
gctgttctcgtgccaccatgttgcttgaaagtgtgtggctcaatgaaggaaggatcctct
gagccaaacactccactaattagtggtagtcatttagctgaagaccttcaagcacaatgg
atgaatctcacagctgaagtggcattaaatcctggtgagctttcggtggtttatatttgt
gagttgccggagatcaaagggaagttctatccagataaggctgctgctctcggagtggaa
cctgggccaaaatatggtcaattgcaaagagggaattcggtggagtcagatcatcaaaat
atcatagttcacccttgcgatgttatggagccttccactcacggtcctattgtgctcctt
gttgactgtccaacaccatctcatctgcaagagttgtcatctttgcagtctcttactccg
ttttactcgaatatatcaggacaacctgtcgaaatgtgcaaaaaagtaaattgtttgata
caccttagccctgtgtcagtaacaaatacacccgcgtatgagcaatggatggccagattt
ggtgaagcccagcacataatggcacgacatgagccgaagaatattgagattccaattctg
aaatccagttcaagaattgctgcaacacttaactacttatgtcctcaattatttccttct
cctggtttttggtctcttcagcaattgaagagcttaccatcaatctcaaagttcccgagg
gagttgtcacgtccaacttcatgtcagatcacttatgcagagaacctcctcaagttccat
cttcttccatacaaagagcttggattagacaattctaatgttcctgctactatttctcgg
acagaaatcttaaatgagctaacttcgaatattccagaaattataagtgcttctgaacat
attagccaactctggcatgggaacaatggaatagttgaagagctacagttgcatgaaact
ccattaccgagctgtttggaaggtataacaagagaagatatggagatagtttttctcgga
actggttcatcgcagccttcaaaataccgaaatgttagttctatatttattaatcttttc
ttaaagggaagtattttgttagattgtggtgaaggaacactgggacaactaaaaagaaga
tttggtgttgaaggtgctgatgaagcagtgaagggtttaaaatgtatttggatttctcat
attcatgcagatcatcatgcgggagttgcaagaattcttgctctgagacatgatttactc
agtggaagtccccacgaacctttaattgttgtaggtcctcggcaacttgaaatatttctt
gataggtaccaaatgctcgaggaactagatatgcagttccttgattgtagggatactaca
gaatcttcatgggaggcttttgagtcaaatgacgataatgatgctaatgggagcacatgc
aggctaaagaacctgctcagacaagcaggattgatgactttgattagtgttcccgttata
cattgtcctcaagcttttggaatcgtcctgaagtttgctgataggactaatgttattggg
aagaagataccaggttggaagattgtttactctggtgacacaaggccttgtccagaattg
gtcaaagcctctcgcgaggcaacgcttctcatacatgaggctacttttgaagatggcatg
ttggaagaggctatagcaaaaaatcacagcacaatgggggaagctattgaggcaggggac
gctgctggagcataccgcgtcatcctcactcacttcagccaaagataccctaaaatccca
gtatttgatggaacatacatgcacaaagcatgcattgcttttgatctgatgagtgttaac
ttggctgatctgcccattcttccaagtgttgttccatatcttaaactcttatttcctgat
gaaatgtctatcaatgaagctaattga
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