Solanum pennellii: 107005990
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Entry
107005990 CDS
T04130
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107005990
Spliceosome [BR:
spen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107005990
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
GEMI5_RBS
Spore_III_AF
Motif
Other DBs
NCBI-GeneID:
107005990
NCBI-ProteinID:
XP_015060115
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All DBs
Position
1:complement(93962144..93967938)
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AA seq
360 aa
AA seq
DB search
MADLNPFDLLGDDDNDDPSKLIAIHQQKVDPAKKASAPAAPAAKKQPGKLPTKPPPPTQA
VREAKTEFGRGGGRGGGRGYSRGRGGGVFNREGSNNENFARNREFSGGIAAPEHVEGGRP
SERRGGYGGPRAFRGGRQGGFGNGEMPEGDRPRRTFERRSGTGRGSEIKREGAGRGNWGT
EADEVTQMTGEVADEGEKNLNVEKPSTEEEAGDDKKENPAAGAADKEPEDKEMTLEEYEK
LLEEKRKALQALKTEERKVDTKVFESMQQISKKPSDEIFVKLGSKDKRKESSEKEEKAKK
AVSINEFLKPAEGERYYAPGGRGRGRGRGSRGYSEANTMSNVEAAPPIEDPGHFPTLGGK
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttgaacccctttgatttgcttggtgatgatgataacgatgatccatcaaag
ctgattgctattcaccagcaaaaagttgatccggcgaagaaagcctcagctccggcggcg
ccggcggctaagaaacagccggggaagctccccactaagcctcctcccccgactcaagct
gtcagggaggcaaaaacagaatttggacgtggtggaggtagaggtggtggacgtggctac
agccgtggtcgtggtggaggtgtgttcaatagggaaggatccaacaatgagaactttgct
cgcaacagagaattttcaggtggtatagctgcgcctgaacacgtggaaggtggaagaccc
tctgaaagacgtggtggttatggtggaccccgtgctttccgtggtggtagacaaggtggt
tttggtaatggagaaatgcctgagggggaccggcctcgtaggacatttgaacgccgtagt
ggtactggacgcggaagtgagataaagcgtgaaggtgctggccgaggaaactggggaact
gaagcagatgaagttactcagatgactggtgaagttgctgatgaaggtgagaaaaatctg
aatgtggagaaaccctccaccgaagaagaagcaggagatgataagaaggaaaatccagct
gctggagctgcggacaaggagcctgaagataaggagatgacccttgaagagtatgagaag
ttgctagaagaaaaacggaaggctttgcaggcgcttaagactgaggaaaggaaggtcgac
acaaaagtatttgaatccatgcaacagatttcaaagaaacccagtgatgaaatcttcgtc
aaattgggctccaaggataagagaaaagagtcttctgagaaggaagaaaaggcaaagaag
gcggtcagcattaatgagtttttgaagcctgctgagggtgagaggtattatgcacctggt
ggtcgaggtcgagggcgtggccgcggttctagaggttacagtgaagccaacacgatgagc
aatgtggaagctgctcctcccattgaagacccaggtcacttccctacattgggtggcaag
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