Solanum pennellii: 107006012
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Entry
107006012 CDS
T04130
Name
(RefSeq) cryptochrome-1-like
KO
K12118
cryptochrome 1
Organism
spen
Solanum pennellii
Pathway
spen04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107006012
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
107006012
NCBI-ProteinID:
XP_015060134
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Position
12:78955493..78959128
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AA seq
583 aa
AA seq
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MSSGGCSIVWFRRDLRLEDNPALAAGVRAGSVIAVFIWAPEEEGYYCPGRVSRWWIKKSL
AHLDSSLKKLGTSLITKRSNDSVSSLLQVVKSTGATRVFFNHLYDPISLVRDNRAKETLS
AEGVAVCSFNADLLYEPWEVVDDEGRPFSTFSDFWEKCLTMPYDPEAPLLPPKRIISGDA
SRCPSDNLVFESELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRSKADSATT
SFLSPCLHFGEVSVRKVFHRIRTKQTLWANEGNKAGEESVNLFLKSIGLREFSRYMSFYH
PYSHERPLLGQLKYFPWLVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FSVKVLQLPWTWGMKYFWDTLLDADLESDALGWQFITGTLPDGCEFLGIDNPQFEGYKFD
PNGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPFPIVEIVAAKERLEEA
LSQMWQLEAAARSAIENGMEEGHGDSTDEFVPIAFPQAMQMEMEANNVPVRNNNPTITAL
RRYGDQIVPSMSSSFFRNEDEETSVDIRNSVVDSRAEVPIISM
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggtggttgtagtatagtatggtttaggagggatctgaggcttgaagataat
ccagcactggctgctggagtgagagcaggatcagtgattgctgtgtttatatgggcacca
gaagaagaaggatactattgccctggaagagtttcaagatggtggattaagaaaagtttg
gctcatcttgattcatctttgaagaaacttggcacttcactcattacaaagagatctaat
gatagtgtttcttctcttcttcaagttgtcaaatctaccggtgcaactcgagtttttttc
aatcatttatatgatccaatatcacttgtaagggataatcgcgcaaaggaaaccttatca
gctgaaggtgtagctgtgtgttctttcaatgctgatttgctatatgaaccatgggaagtt
gtcgatgatgaaggccgtccattcagcacattttctgatttttgggaaaaatgtcttacc
atgccttatgatcctgaagctccacttcttccgcctaaaaggataatatctggtgatgca
tcaagatgcccttcagacaacttggtgtttgagagtgaattagagaaaggaagcaatgca
cttcttgctcgagcgtggtctcctggttggagcaatgctgataaggcactcactactttc
attaatggaccattgattgagtattccaaaaatcgtagtaaagctgatagtgcaacaacc
tcatttctgtcaccgtgtttacattttggtgaagtcagtgttcgtaaggtattccatcgt
attcgtactaaacaaacactctgggctaatgaaggaaacaaagcaggtgaagagagtgtc
aacttgttcctcaagtctatcggccttagggagttctcgagatacatgagcttttatcat
ccttacagtcatgaaaggccattgcttggtcagctgaagtacttcccttggttagtagac
gagggttattttaaggcgtggaggcaaggtagaacaggttatcctttggttgatgcaggt
atgagagaactttgggccactggctggctacatgatcgtattcgagttgttgtgtctagt
ttctctgttaaggttctgcagcttccttggacatggggaatgaagtatttctgggacaca
ctgttagatgcagatctcgagagtgatgctcttggttggcagtttattaccggtacccta
cctgatggttgtgagttcctcggaattgataatccacagtttgagggatacaagtttgat
ccaaatggggaatatgttcgacgatggcttcctgaacttgctaggctgcccacagaatgg
atacaccacccatgggatgcaccagaatctgtacttcaagctgctggaatcgagcttggt
tccaattatccttttcccatcgttgagatcgttgcagcaaaagaacgactagaagaagcg
ttgtcacaaatgtggcagcttgaagcagctgcaagatctgctattgagaatggaatggag
gaaggacatggagactccactgatgagtttgtcccaatagcttttcctcaggctatgcag
atggaaatggaagctaataatgtaccggtcaggaacaataatcctacaattactgctcta
cgacgttatggagatcagattgttcctagcatgtcatcttccttttttaggaatgaagac
gaagaaacctctgttgatattagaaattcagttgtagatagtagagcagaagttccaata
atatcgatgtaa
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