Solanum pennellii: 107006048
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Entry
107006048 CDS
T04130
Name
(RefSeq) protein MADS AFFECTING FLOWERING 5-like
KO
K27808
MADS-box protein FLC/MAF
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spen03000
]
107006048
Transcription factors [BR:
spen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
107006048
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
DUF7117
Motif
Other DBs
NCBI-GeneID:
107006048
NCBI-ProteinID:
XP_015060177
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Position
12:complement(79053562..79068398)
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AA seq
205 aa
AA seq
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MGRRKVEIKRIQDKNCRQVAFCKRRKGLLKKAKEISVLCDVDVAVVIISNRGRLHEFSSN
NSLTEMLQRYKSHIEAEKEISTEIQVAEHSKYSGFITMGELLQTTERQLEETNDDVLTVT
DLIHLENELQTALIQLRSRKTHLLLESAKGLHEKEKLLQEEKKHLVDNIASIKKNTKVNE
MSTDFADFPAPHMIFGQQKITLNFL
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggggcgaaggaaggtagaaattaagcgaattcaagataaaaattgcaggcaagttgcg
ttctgtaaacggaggaaaggtttattgaagaaagctaaagaaatttccgttctctgtgat
gtcgatgttgctgttgttatcatctcaaatcgaggcaggctccatgaattctccagcaat
aacagtctgacagaaatgcttcaacgatacaaaagccacatcgaagcagaaaaagagatc
tctacagaaatccaggtggcagagcactctaaatactcagggttcataacaatgggagaa
ctgctacaaacaacagaaaggcaactcgaggaaactaatgatgatgttctcactgtgact
gaccttatccatttggagaacgaacttcaaactgctctaatacaactcagatctagaaag
acacatttgttgcttgaatctgctaagggtcttcatgagaaggaaaaactgctgcaagag
gaaaagaaacatctggtggacaatatagctagtatcaagaaaaacacaaaagtgaatgag
atgtctacggatttcgctgactttccagcaccccatatgatttttggacaacagaaaata
accctgaatttcctctag
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