KEGG   Solanum pennellii: 107006079
Entry
107006079         CDS       T04130                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
spen  Solanum pennellii
Pathway
spen03013  Nucleocytoplasmic transport
spen03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107006079
   03015 mRNA surveillance pathway
    107006079
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spen03019]
    107006079
   03041 Spliceosome [BR:spen03041]
    107006079
Messenger RNA biogenesis [BR:spen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107006079
Spliceosome [BR:spen03041]
 Complex C
  Other components
   EJC/TREX
    107006079
SSDB
Motif
Pfam: Pinin_SDK_memA
Other DBs
NCBI-GeneID: 107006079
NCBI-ProteinID: XP_015060216
LinkDB
Position
1:103643572..103648076
AA seq 411 aa
MASGVVEKTEEELRKELFELNRQQREITERLKDPRGLRRGGGGPRSFVANGGRQRGVVRP
AERNDAEDQPAPKRRMSSTVVKIEEGEIAEDVSGAPRDANKEESIVEAIPRVAPANQNER
KPSNWLRRDGFQRPSKMDFDIPPPEPVPRVLPKNEDPKLVSRNKRMLGQLLGTLEKFRKE
DMQLSGTEAYMRRSDSLKRAEQRAREESEKLRQQEREQLDEKLKRDLTLRARLAAKAEEK
RLELLFLRWSEHHKKLANFIRTKAEPPIFYSFAKPLEEDSTLLEQRKDQIFEEWKAARRE
ELSQYQKKIAEQNIAKAEEEWKNILERRANKNVANLQETMDKELETHRLERGPKIRKIPG
VSNNEDEDVEDINVVEDDMMDDVLEVDENNQRSDENVKVEAGNGGPRIDEQ
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggcgagcggcgtagtggagaagacggaggaagagctccgcaaagagctctttgaactc
aataggcaacaacgcgagattactgagcggcttaaggatccaagaggtcttcgacgcggt
ggcggaggtccacggagttttgttgccaatggtggccgccaacgcggcgttgttagacct
gccgagaggaatgatgcagaggatcagccagcacctaaaaggcgtatgtcttctactgtt
gtgaagattgaagagggggagattgctgaggatgtatccggagctccaagggatgcaaat
aaggaagagtcaattgtggaggcaatcccaagggtggcacctgccaaccagaatgaaagg
aagccatccaattggctacgaagagatggctttcaaaggccatccaaaatggattttgat
atacctccaccagagcctgtgccaagagtgttgcccaaaaacgaggatcctaaattggtt
agtaggaataagagaatgttggggcagctgctggggaccttggagaaattccggaaagaa
gacatgcagctttcagggacagaggcttacatgcggaggtcagattctttgaaaagggct
gagcaaagggcgcgcgaagaaagtgagaagttaagacaacaagagcgggagcagcttgat
gaaaagctgaaaagagatctgactcttcgagcacgtcttgctgctaaagctgaggagaag
aggctggaattgctgtttctccggtggagtgagcaccacaaaaaactagccaattttata
aggaccaaagccgagcccccgatcttttattcttttgccaaaccattggaagaagattca
accttacttgagcagagaaaagatcagatattcgaggaatggaaagctgcaaggagagag
gaattgtcgcaataccagaaaaaaattgctgaacagaatattgcaaaagctgaggaggaa
tggaaaaatattttagaaaggagagccaacaaaaatgttgcaaaccttcaagagacgatg
gacaaagagctagagactcataggcttgagcgtggacccaagattcgaaagattcctggt
gtcagcaacaatgaagatgaggatgttgaggatatcaatgttgtggaggatgatatgatg
gatgatgtgctagaagtggatgagaataaccagaggagtgatgaaaatgtgaaagttgaa
gcaggcaatggtggtccacggattgatgagcagtag

DBGET integrated database retrieval system