Solanum pennellii: 107006421
Help
Entry
107006421 CDS
T04130
Name
(RefSeq) serrate RNA effector molecule
KO
K27103
serrate RNA effector molecule
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107006421
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
107006421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
107006421
NCBI-ProteinID:
XP_015060466
LinkDB
All DBs
Position
1:complement(3437932..3451620)
Genome browser
AA seq
749 aa
AA seq
DB search
MAEVMDAPAEGLERRRERSKENPNKSTEEPPVSSPPPPPPPPPPSRRGRDRDSRERRDDR
DFDRRGGRGDYYDRNRSPPHHPPGRERDYKRGRPSHSPPPPLPPYRDRRGGYSPPHRRSP
PFPPYKRSRRDDYDGRRGSPRGGFGHGDRRYGYDHQGGYDREMGGRPGYPDERHHGRFAG
RSSGGYRGGDWGPVRGGFADSFGAGNNQREGLKSYKQFIQELEDDILPAEAERRYQEYKA
GYIEAQKRAYFNAHKDEEWLKDKYHPSNLISVIERRNELARKSAKDFLLDLQSGTLDIGP
GVAPPPTNKSGQSSEPNSDEEADENGKRRRHGRGHNKDPDLLLAAPKAHLVSSDPRRVQI
DVEQAQALVRKLDSEKGIEDNILSRSDNDRGSRDKSHGSTGPVIIIRGLTSVKGLEGTEL
LDTLLTYLWRIHGVDYYGLAETNEAKGLRHVRVDGKASDATSNGAEWESKVDSHWQDRLK
GKDPLEVMAAKEKLDAVAAEALDPYVRKIRDEKYGWKYGCGAKGCTKLFHASEFVHKHLK
LKHPDLSVDLTTKVREDLYFQNYMNDENSPGGTPVMLPSVPKEKPVRRRPGLDGRLKDDR
GNRKDRDGRANGGERFDMSENPQSGDFQSNNDGATGGNPDEEMFDTFGGQGIPVASFPSD
MAPPPVLMPVPGAGPLGPFVPAPPEVAMRMMREQGGPTPFEGGRNGRSGPAGPIIALPPG
FRQDPRRLRSYQDLDAPEDEVTVIDYRSL
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagtaatggacgctccggcggaaggtttagaacgccgccgtgaacgaagcaag
gaaaatccaaacaagtcgacggaagagccaccggtatcttctccaccaccgcctcctcct
cctccgccgccgtcgaggcgtggccgcgatagagattcacgggaacggagggatgacagg
gattttgatcgtagaggtggtcgtggggactattacgatcgtaatcgttctcctcctcat
catcctcctggtcgagagcgtgactacaaacgtggaaggcctagccatagccctcctcct
cctcttcctccttatcgtgaccgacgtggtggatattctcctcctcaccgccgttcgcct
ccatttccaccttataagcgttctcgtagagatgactatgatggacgccgtggaagccct
agaggtggttttgggcatggtgatcgaagatatggttatgaccatcaaggaggttatgac
cgtgagatggggggtagacctggttatcctgatgagaggcatcatggacgatttgcagga
cgctcgtctggtggctatcgaggaggagactggggccctgttcgcggaggatttgcagat
agctttggtgcagggaacaatcaaagagagggattgaagtcttataagcagttcattcag
gagcttgaagatgatatcttgccagctgaagctgagcgcaggtaccaagaatacaaggct
gggtacatagaagcacaaaaaagagcttattttaacgctcataaagatgaagaatggttg
aaagacaaataccatccatcaaacttaatttctgttattgaaaggaggaatgagcttgca
aggaaatcggcgaaggatttcttacttgatttgcagagtggaactctagacataggtcct
ggtgttgcacctcctcctacaaacaaatcaggacagtcaagtgagccaaattctgatgaa
gaagcagatgaaaatggcaaaaggaggaggcatgggaggggacacaataaagaccctgac
ttacttttagctgctccaaaggctcacctagtgagttctgatcccagaagagtccagatt
gatgttgaacaagcacaggcacttgtgaggaagcttgactcggagaagggaatagaggat
aacatactatctcggtctgataatgataggggaagcagagacaagtctcatggttccaca
ggcccagttattatcataaggggcttaacttcagtgaaaggtcttgagggaactgagtta
cttgatacacttctaacctatctgtggcgcattcatggggtggattattatggcctggca
gagacaaatgaagctaagggtctccggcatgtgagagtggacggcaaggcttctgatgca
acaagcaatggagcagagtgggaatcaaaagtggattctcattggcaagacaggctgaag
gggaaggatcccttggaggtaatggctgcaaaggaaaaacttgatgctgttgccgccgaa
gccttagatccctatgtccgtaaaattagggatgagaagtatggctggaaatatggttgc
ggagccaagggttgtacaaagctcttccatgcgtctgaatttgtccataaacatttaaag
ttgaaacaccctgatctgtcagtggatctgactactaaagtgcgtgaagatttgtatttc
cagaactatatgaatgatgaaaattctcctggtgggactcctgtaatgctgccatctgtg
ccgaaagagaagccagttaggcgccgacctgggctagatggccggctgaaggatgacaga
gggaaccgtaaagatcgggatggacgtgctaatggcggtgaaaggtttgatatgtctgaa
aatccacaatctggggattttcagtccaataatgatggtgccactgggggaaatcctgat
gaagaaatgtttgatacttttggtggacaagggattccagttgcttctttcccttcagac
atggctcctccaccagtattgatgcctgttcctggtgctggtcctcttggtccatttgtt
cctgcgcctcctgaagttgcaatgcgaatgatgcgagaacaaggaggccctactccattt
gaaggcggtcgaaatgggaggtctgggcctgcaggcccgataattgctttacctcccgga
tttcgacaggatcctcgtcgcttgcgaagctatcaagatcttgatgcacctgaagatgaa
gttaccgtaatagattacaggagtttgtag
DBGET
integrated database retrieval system
