Solanum pennellii: 107006568
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Entry
107006568 CDS
T04130
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
spen
Solanum pennellii
Pathway
spen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107006568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107006568
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107006568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
COG3_N
Motif
Other DBs
NCBI-GeneID:
107006568
NCBI-ProteinID:
XP_015060576
LinkDB
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Position
1:94512672..94522974
Genome browser
AA seq
764 aa
AA seq
DB search
MSTGFSFSSSTSPFSFSSNPSFSTTPSVTATTSASGSSPFSSPFANPNPTSSAPSFGFGT
STTSASSAPSFGFGSSTTSASSAPPFGFGSNTGASTPSFGFSSSAASGSSPQPTLFGSSS
GSAATSNLFGSSSGSGTTTNLFGSTTSASGSPLFGANSASAAANSSPFGSSPFGSSGTPS
PGLFGSSSAAGSSSGLGLLGSSPFLSSTAASTGNAASSASTTPFSSSPFGSSSSASSSPF
GSSSTAPSFGFPSSAASLSFQSASNSASSSPGLSFASSAAASSFSSSSAFSFPGASPASS
ASSAPGFSLLSTSTTTSVSSAPGFSLAAASTCSAVSSPAFSFSTSSSAASGPACSLSTPT
PSAASPAPSFSFSMPAAASSSPSPFSASTTLSFSVAKGTVSSVTASAASSSAPVSKPAST
GFSISSSPLFSTVTTPTSISTTAAATGASSTTSGTGLSLTFPAPTSSASTTSAVDTSPIA
GFGTSAQSTGFSLSSKASAPALSSQPQSTAAVPSFGVPSTTSATATTSAAQTSSPLTVAS
SSGTTSTSTVVATSTPKLPSEITGKSVEEIIKEWNAELQERTAKFRKQANAIAEWDRRIL
QNRDILLKLESEVAKVVETQGSLERQLELIETHQEEVDKALQSMEEEAERIYKDERGVIL
DDEAAATRDAMYEQAEFVEREMEKMTEQIKSIINTFNACQGGELEATDGMTPLDVVVRIL
NNQLSSLMWIDEKTEEFSSRIQKLASEAPAANRESTAPKLWLTR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaggcttttcattctcctcttctacttcacccttctctttctcttcaaatccg
tctttttccaccaccccctctgtcaccgctaccacatccgcttccggttcttccccattt
tcctcgcccttcgcaaaccctaaccccacctcctctgctccttcttttggcttcggtaca
tctactacttcagcctcttctgctccttcttttggcttcggttcatctactacttcagcc
tcttctgctcctccttttggtttcggctctaataccggtgcttctacaccgtcatttggg
ttttcatctagtgctgcttctggttccagtccccaaccaactctatttggatcttcttcc
ggttcggctgcaacttcaaacctattcggatcatcttccgggtcgggtacaacgacgaat
ctcttcggatccactacatctgcaagtggttcgccattgtttggggcgaattcagctagc
gccgctgccaattcatccccttttgggtcttcacctttcgggtcgtcaggtacgccctcg
ccgggtttgtttgggtccagttcggctgctggttcaagttcgggcttgggcttgcttggt
tcttctccgtttttatcatcaactgctgcttctactggaaatgcagcatctagtgctagt
acaactccattttcttcatctccatttgggtcttcttcttcagcatcatcttcacctttt
ggatcatcttcaacagccccttcatttggttttccgtcatcagcggcctcactttcgttc
cagtcggcgtcaaattcagcttcttcttcacctggactttcgtttgccagctcggcagct
gccagttccttttcttcttcatctgcattttctttccctggtgcttcacccgcaagttca
gcttcttctgcaccgggattttcattgttaagtacttcaaccaccacttcagtatcttct
gcaccgggattttcgcttgctgctgcatcaacttgttctgcagtctcctcaccagcattt
tcattttcgacctcgagctcagcagcatcaggtccagcatgttcattatcaacgccaacg
ccgagtgcagcatcacctgcaccttcattctctttttccatgcctgctgcggcttcgtca
tccccatcacctttttcagcttctactactttgtcattttcggttgcaaaagggactgta
agctctgtaacagcttctgctgcttcttcaagtgctccggtgtctaaacctgccagtact
gggttttcaatttcttcatcgcctttgttttcaactgttactacccccaccagcatttct
acaaccgcagctgctactggagcttcttctacgactagcgggactggtttatctctgaca
tttcctgcacccacttcttcagcttcaacgactagtgctgttgatacatctccgattgct
gggtttggcacctctgcccaatctacaggtttttcattgtctagcaaagcatctgcacca
gctttatcctcacagcctcaatcaactgcggctgtgccaagctttggtgtcccgagcaca
acttctgccactgcaactacttcagctgctcaaacatcatcacccttgactgtggcttct
agtagtgggactacttcaacttctactgtagttgccacttccacaccgaaattaccatca
gaaattacaggaaagtctgtagaagagatcatcaaggaatggaacgctgagctgcaggaa
cgtactgcaaaatttagaaagcaggctaatgcgattgctgagtgggacagaaggatcttg
cagaaccgtgatattcttctcaaacttgagagtgaagttgcaaaggttgttgagacacaa
ggcagcttagagcgacagctggagctaattgagactcatcaggaagaggttgacaaggca
ttgcaaagcatggaagaagaagctgagcgaatttacaaagatgagagaggagtgattctt
gatgatgaagctgcagcaacaagggatgcaatgtatgaacaggccgagtttgtggagagg
gaaatggagaaaatgacagagcagatcaagtcaatcattaatacttttaatgcctgccag
ggtggagaacttgaggcaactgatggaatgacaccgcttgatgttgttgtacgaatcttg
aacaatcaattgagttcactgatgtggattgatgaaaagactgaagaattctcatctcgt
attcagaagcttgcaagtgaagcgcctgctgccaatcgtgaatcgactgcccctaaatta
tggttgactcgatga
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