KEGG   Solanum pennellii: 107006864
Entry
107006864         CDS       T04130                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
spen  Solanum pennellii
Pathway
spen03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107006864
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spen03019]
    107006864
Messenger RNA biogenesis [BR:spen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107006864
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     107006864
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 107006864
NCBI-ProteinID: XP_015060869
LinkDB
Position
12:2730836..2733222
AA seq 129 aa
MSNWSDSNDYLFSSSLASYLDGKIIILLRDGRELLGTLRSFDQYANIVLEGTKERVIVGN
LYCDISLGLYIVRGENVMLIGQRESDEEELPPHMTCVSEIEIKRVQKADKNAEELKGSTR
RRMEFIDFD
NT seq 390 nt   +upstreamnt  +downstreamnt
atgtctaattggtcagattcaaatgactacttgttctcatcaagccttgcaagctatctt
gatggaaaaattattatattactgcgagatggtagagaactcttgggaactttacgttct
ttcgatcagtatgcaaatatagtattggaaggtactaaagaaagagtaatagtgggaaat
ctctattgtgacatatctttgggtctctacattgttcgtggggagaatgttatgctcatt
ggacaacgggagtctgacgaggaggagctccccccacacatgacatgtgtttcagaaata
gaaatcaaaagggttcaaaaggcagacaagaatgcagaagaactaaagggttccactaga
agaagaatggagtttattgactttgactag

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