Solanum pennellii: 107006903
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Entry
107006903 CDS
T04130
Name
(RefSeq) DNA topoisomerase 2 isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spen03032
]
107006903
03036 Chromosome and associated proteins [BR:
spen03036
]
107006903
Enzymes [BR:
spen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
107006903
DNA replication proteins [BR:
spen03032
]
Eukaryotic type
DNA Topoisomerases
107006903
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
107006903
Centrosome formation proteins
Centriole proteins
107006903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
107006903
NCBI-ProteinID:
XP_015060904
LinkDB
All DBs
Position
1:complement(92294869..92301615)
Genome browser
AA seq
1477 aa
AA seq
DB search
MATKKLPLQSSSNANITNANGKTIEQTYQKKTQLEHILLRPDTYIGSVEKHTQTLWVWED
DRMVNRPVTYVPGLYKIFDEILVNAADNKQRDPKMDAVEVVIDPRQNLVSVYNNGDGIPV
EIHQEEGVYVPELIFGHLLTSSNYDDAEKKTTGGRNGYGAKLTNIFSTEFVIETADGKRQ
KKYKQVFSNNMGKKGEPIITKCKASENWTRVSFKPDLAKFNMEELEADVVALMRKRVIDL
GGCLGKTVKVKLNEQRIPVKSFEEYCKLFLDSHDVKREFLKVNDANGVLRWEICVSLSEG
QFQQVSFVNSIATIKGGTHVDYVANQIANHIMGVVNRKNKNANIKAHAVKSHLWMFVNAL
IDNPAFDSQTKETLTLRQSSFGSKCELQPDFLKKVEKNIGIVDSLLSWADFKLSKDLKKT
DGKKSDKVKVEKLEDANDAGGRNSDKCTLILTEGDSAKALAMAGISVVGRDHYGVFPLRG
KLLNVREASHKQVSENKEIESIKKILGLQTGKEYDSVKSLRYGHLMIMTDQDHDGSHIKG
LLINFIHTFWPSLLKVPSFLVEFITPIVKATHKSGRILAFYTMPEYEAWRRSLGATSSGW
SIKYYKGLGTSTSKEGKEYFQDLQKHRKDFVWADNQDGESIELAFSKKKIEARKNWLRQF
EPGTHLDQKEKYISYTEFVNKELILFSMADLQRSIPSMLDGLKPGQRKILFCAFKRNFVK
EAKVSQFSGYVSEHSAYHHGEQSLSSTIIGMAQDYVGSNNVNLLQPNGQFGTRNMGGKDH
ASSRYIYTRLSPIARFLFPKDDDTILDYLNEDGQSIEPTWYVPIIPMVLVNGSEGIGTGW
SSYVPNYNPRDLVANVRRLLNDELMEPMDPWYKGFKGKIEKTATKETGATYTVTGIIEEV
SETTLRISELPVRRWTEDYKQFLESMTVSTDKAKDSFIKEVRAYGDENSVCFEVIMSEDN
LLLAQQEGLLKKFKLTTTISTSNMHLFDSKGKIKKYDAPEEILEEFYHVRLEYYEKRKKA
LLEILELELLRIENKVKFILGVVKGEIIVNNRKRAELLLELKNKGFTPFPKKKPVEAVVA
DSTDDADDSEESPEESNRGVRASDYDYLLSMAIGTLTLEKVQELCADRDKLNAEVEDMRN
ATPKDLWMKDLDVLDKQLDEQDKIDIQTEEAREKLKKKVMNAAGKAAPKPKPRKTNKKAE
STAESMDVSSGSTAETANVSEVVKPKGRGRPAKQAKPVVIEDEEEEDEVLALKDRLAAYN
LNSSPDRSEVTETEAPKAQTKAPAKRAAAQKKALPSTPDVSDGEDAIEIDDDEFEPAAAV
GGKKKGGRKPAAAKAAAAPKPPEKRAAANNQSQSVGQRLITQVLKPAEDAGVSPDRKVRK
MRASPFNKKSGAVMGKNTSSSSTSHESEEVSPLIPSLGSLDEEVSEVVVAPKARPQRATK
KTTTYVISDSDTEEDNDDIEISDDDIELSDDTDSDFE
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaaaaactcccgttacaatctagtagcaacgccaatattacaaatgcaaac
ggaaaaacgattgaacaaacctaccagaagaagacccagcttgaacacatccttctccgt
cccgatacgtacatcggatctgttgaaaaacacactcaaactctttgggtatgggaggat
gacaggatggttaatcgcccagtcacttatgtgcctgggctgtacaagatttttgatgag
atcttagtcaatgcagctgataacaaacagagagatccgaaaatggacgcggtggaagtg
gttatagatccgagacagaatttagttagtgtgtacaacaatggtgatggtattcctgtc
gagatccatcaggaggagggtgtgtatgtgccagaattgatttttgggcatttgttgact
agtagtaactatgatgatgctgagaagaaaaccactggtggaagaaatggatatggtgct
aagcttacgaatatcttttctactgaatttgtcattgaaactgctgatggaaagcggcag
aagaagtataagcaggttttctctaacaacatgggaaagaagggtgaaccaattataact
aaatgcaaagcaagtgagaattggacaagagtttcatttaagccagacctggcaaagttt
aacatggaagagctcgaagcagatgtagttgcactaatgagaaagagagtaattgatttg
ggtggatgccttggaaagactgtgaaggtgaaactcaatgaacagcgtattcccgtcaaa
tcatttgaagagtattgcaagcttttcttggattctcatgatgtgaaaagggagttcctg
aaagttaatgatgcaaatggagtattaaggtgggagatatgtgtgagtttgagtgaagga
caatttcaacaggtcagttttgtgaacagcattgcgactattaagggtggtactcacgtt
gattatgtggctaaccaaatagcaaaccacataatgggtgtagtgaacaggaagaacaaa
aatgctaacatcaaagcccacgcagtgaagagccatttatggatgtttgttaatgctctc
attgacaatcctgcatttgattcacaaactaaagaaaccttgaccctgcgtcagagcagt
ttcggttcaaaatgtgaacttcaaccggattttctgaagaaagttgagaagaatattggc
attgtcgactctcttctctcctgggcagactttaaacttagcaaagatcttaagaagact
gatggaaaaaaatctgataaggtcaaggtggagaagctggaagatgctaatgatgcagga
gggaggaattctgataaatgcacattgattttgactgaaggagactcagccaaggctcta
gctatggctggaatatctgttgttgggagagatcactatggtgtgttccctttgaggggt
aagctgctaaatgtaagggaagcaagtcataaacaggtttcagaaaataaagaaattgaa
tctatcaagaagattcttggacttcagacaggcaaagaatatgacagtgtcaaatcactc
agatatggtcatttaatgattatgactgatcaggatcatgatggttcacatatcaagggt
ctcttaattaatttcatccacactttttggccgtccttgctgaaagttccatctttcttg
gtggagtttatcacaccaattgtgaaggctactcacaaaagtgggaggatactggcattt
tataccatgcctgagtatgaggcatggagaaggagtttgggtgctacttcaagtggttgg
tctatcaagtactataaggggttgggaacaagtacttcaaaagaaggaaaagagtacttc
caagatcttcagaaacacaggaaagattttgtctgggcagataaccaagatggggaatca
atagaacttgctttcagtaagaagaagatcgaagcaaggaagaattggcttagacaattt
gagcctggcacccatctagaccagaaagaaaagtacatctcgtacaccgaatttgttaac
aaagagcttattctgttttcaatggctgaccttcaaaggtctattccttcaatgcttgat
ggtttgaaaccgggtcaaaggaagattctgttctgtgcatttaagaggaattttgttaag
gaagcaaaagtttcccaattttctggttatgtctctgagcactcagcttatcatcatggt
gagcagagtcttagcagcaccatcattggcatggcacaagactatgttggcagcaataat
gtaaatctattgcaaccaaatggtcagtttggcactcgaaatatgggaggcaaagatcat
gcaagttctaggtacatttacactaggctttcaccaattgcaagatttctgtttcctaag
gatgatgataccatccttgattacttgaatgaagatggacagtctattgaacctacttgg
tatgtaccaataattccaatggtacttgtgaatggaagtgaaggtataggaacaggttgg
agttcatatgtccctaattataatccaagggacctggttgcaaatgtaaggcgtttactg
aatgatgagctaatggagccaatggatccatggtataaaggtttcaaagggaaaatagag
aaaacagcaacaaaagaaactggagcaacctacactgtcactggtattatagaagaggtc
agcgaaacaactcttaggatttctgagttgccagttcggaggtggacagaggactataag
cagtttttggaatccatgacagtctcaactgacaaggccaaggattctttcataaaggaa
gtcagagcgtatggtgatgagaactctgtatgttttgaagtgatcatgtctgaggacaat
ctgctattggcccagcaagagggtttgctgaaaaaatttaagctgactactacaataagt
accagcaatatgcaccttttcgactccaaggggaaaatcaagaaatatgatgccccagaa
gagattcttgaggagttctaccatgtacgactcgagtattatgagaaaagaaagaaagct
ctattggagattctcgaattggagttgctgagaattgagaacaaggtgaaattcatcctt
ggagttgtgaaaggcgaaatcattgtgaacaacaggaagagagctgagctcttgcttgaa
ttgaagaacaaaggatttactcctttccccaagaaaaagccggttgaagctgttgttgca
gactctactgatgatgcagatgatagtgaagagagtccagaggagtcaaataggggagtt
agggcaagtgattatgactacttgctgtcgatggcaataggaacattgactcttgagaag
gttcaagagctgtgtgctgacagggataaactgaatgctgaagttgaagatatgagaaat
gcaactccaaaggatttatggatgaaagatcttgatgtccttgacaaacagcttgatgaa
caagataaaattgatatccaaactgaggaagctagagaaaagctaaagaagaaggtgatg
aatgcagctggaaaagcagcacccaagcctaaaccccgaaaaactaataagaaggccgag
tctactgctgaatcaatggatgtgtcgtctggttctacggcggaaacagccaatgtttct
gaggttgtgaagccaaaaggcagaggtcgtcctgcaaagcaggcaaaacctgtagttata
gaagatgaagaagaagaggatgaagtgctagcgttgaaagatagacttgcagcttacaac
ctcaactcttctccagatcgatcagaagtcacagagactgaagcgccaaaagctcaaacg
aaagcacctgctaaaagggctgctgcacaaaagaaggctctgccatccactccagatgtt
tctgatggtgaggatgcgattgaaattgatgacgatgagtttgagccagcagcagctgtg
ggagggaaaaagaaaggtgggaggaaaccagcagctgcaaaagcagcagcagcacctaaa
ccccctgagaagagagcagctgctaataatcaatcacagagtgttggtcagagactcata
actcaagttctgaagcctgcagaggatgctggtgtgtcacctgaccgtaaagtgagaaaa
atgagggcatctccatttaacaagaaaagtggagctgttatgggaaagaacacaagtagc
agtagtacttcacatgaaagtgaagaagtaagtcctcttattccttccttgggcagtcta
gatgaggaagttagtgaagttgttgtcgctccaaaagctagaccacagagggcaacgaag
aagacgacaacatatgttatcagtgactctgatactgaagaggataacgatgatattgaa
atttctgatgatgatatcgaactttctgatgatactgattctgattttgagtag
DBGET
integrated database retrieval system
