Solanum pennellii: 107007102
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Entry
107007102 CDS
T04130
Name
(RefSeq) SNW/SKI-interacting protein A
KO
K06063
SNW domain-containing protein 1
Organism
spen
Solanum pennellii
Pathway
spen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107007102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107007102
Spliceosome [BR:
spen03041
]
Complex B
Other components
Prp19-related factors
107007102
Complex C
107007102
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
PEX14-like_2nd
Motif
Other DBs
NCBI-GeneID:
107007102
NCBI-ProteinID:
XP_015061056
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All DBs
Position
12:2008935..2012410
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AA seq
598 aa
AA seq
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MASLKELLPAAKSTTSTVYDHTSDPWFKNRYSATEAEKSAVIKANPVPPYLKRAGFRPSK
LEDFGDGGAFPEIHYAQYPLDMGRKKDWKAGGKNLPVTVDEHGEVRYDAIVRQGENAKKI
VYSQHKDLIPKFVKEDESDEEMDQDEKQKVIDETMEETKAALEKIVNVRLSAAQPKNVPT
QSQESKFIKYKPSQQAAAFNSGAKERIIRMVEMPVDPLDPPKFKHKRVPRASGSPPVPVM
HSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEA
LYVAEQKAREAVAMRSKVQKEMMMKEKEKKEIELRELARKARSDRLVGVPSAAAHVPSER
DSRNVDDMNEDYERARDLPKESRGEREERLNREKIREERRRERERERRLEAKDAAMGKKS
KITRDRDRDVSEKVALGMASTGTSRGEVMYDQRLFNQEKGMDSGFAVDDSYNVYDKGLFT
AQPTLSTLYRPKKDTDSEMYGGADEQLDKIMKTERFKPDKAFSGTSERTNTRDGPVAFEK
EVEEADPFGLDQFLTEVKKGKKAMSNVGSGGTMKASAGSTRDGYETSSRTRIAFDKGR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctcaaggagcttcttccagcagcaaagtccactaccagcacagtctatgac
catacaagtgacccgtggttcaagaataggtacagtgcaactgaggcggagaaatctgca
gtaatcaaggcaaatccggtacccccttatctaaaacgggctggatttaggccatccaag
ctcgaggactttggggatggaggagcgttccctgaaatccattatgcacaatacccactt
gatatgggcagaaagaaagactggaaagccgggggaaagaatttgcctgttactgtggat
gagcatggtgaagtgcgatatgatgcaattgtgaggcagggtgagaatgcaaagaaaatt
gtttattctcagcataaagatcttatccccaagtttgtgaaggaggacgagagtgatgaa
gagatggatcaggatgagaagcagaaagtaatcgatgagacaatggaggaaactaaagca
gcacttgagaagattgtaaatgtgcggttgagtgctgcacaacccaaaaatgttcccaca
caatctcaagagtccaagtttattaagtacaagccttcccagcaagcggcagcttttaat
tcgggtgcaaaggagaggattattaggatggtagagatgcccgtggaccctctggatcca
ccaaagttcaaacacaagagggtccctagggcctctggttctccacctgtgcctgttatg
cattctcctccccgtccagttacagtgaaggaccagcaggactggaagattccaccttgt
atatcaaactggaagaaccccaaaggttacacaatccctcttgataagcgtcttgctgct
gatggcaggggacttcaagatgttcagatcaatgataattttgcaaaactatcagaggct
ctgtatgttgcagaacagaaagccagagaagcagttgcaatgcggtcaaaggttcagaaa
gagatgatgatgaaagaaaaggagaagaaagagatagaacttcgggagttggcccgcaag
gcaagatctgatagattggttggggtaccttcagctgctgcacatgtaccttctgagagg
gactccaggaatgttgatgatatgaatgaggactatgagcgagcaagagatttgcccaaa
gaatcaaggggggaaagggaagaaagattgaatagagagaagatacgtgaggagcggcgc
cgtgagagggagagggagaggagattggaggcaaaagatgctgcaatgggtaagaagagt
aagatcaccagagatagagaccgtgatgtgagtgaaaaagtggctcttggaatggcttct
actggcacatcaagaggagaagtcatgtatgatcagagattgttcaaccaggagaaaggg
atggattctggatttgcagtggatgattcctacaacgtctatgacaagggactatttacc
gctcagcccactctttctactctatacagaccgaagaaagatactgattctgaaatgtat
ggaggtgcagatgagcagctggataagatcatgaagacagagcgctttaagcccgacaag
gcattttctggaacatctgagaggactaataccagggatgggcctgtggcatttgaaaag
gaagttgaggaagctgatccatttggtctagaccagttcttgacagaggttaagaaggga
aagaaagccatgtcaaatgttggtagtggaggcaccatgaaggctagtgctggctccacg
cgagatggttatgaaacatcaagcagaactcgtattgctttcgacaaagggcgttga
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