Solanum pennellii: 107007116 Help Entry 107007116         CDS       T04130                                  Name (RefSeq) protein CHROMATIN REMODELING 5   KO K11367   chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] Organism spen  Solanum pennellii Brite KEGG Orthology (KO) [BR:spen00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:spen03021]     107007116    03036 Chromosome and associated proteins [BR:spen03036]     107007116 Transcription machinery [BR:spen03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      107007116 Chromosome and associated proteins [BR:spen03036]  Eukaryotic type   Histone modification proteins    HAT complexes     SAGA complex      107007116     SLIK complex      107007116 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom HTH_Hrp3 Helicase_C Chromo CHD1-like_C HDA2-3 ResIII DEAD Chromo_MIT1 SWI2_SNF2 Motif Other DBs NCBI-GeneID:  107007116 NCBI-ProteinID:  XP_015061077 LinkDB All DBs Position 12:82798543..82821425 Genome browser AA seq 1707 aa AA seqDB search MAFYRNYSNETVTLDDKSQGEQSMQGIHQDVGNEEVEGSLSENDDNGQLQDEVGVEVETT AEDQVPPGRGVNLSGKWGSGFWKDCQPMGPSGRSGSGEESKSGSEYKNEEESDEVSDGRE DQLESEDEGRQKEMGKSRSVPADEMLSDEYYEQDGDDQSDSLHYRAANPSSGYSSKLQSR PVSASKYASRKAKASKDQEDNEYADYEDDDSEDEDDPDDPDYGSTGRGKGIKDKDDDWEG GESDEVNSDDDEVGISDEDEEYYRKPQGKQKNRGGHSVKSTRVVRSLATSARQKRGRTSY EEEESSEHDSENESDEDFGNKPRRVANLRLKNSGRSSAASVSGRNSEIRTSSRRSVRKVS YAESEESEEIDESKQKKGQKEELEEEDCDSIEKVLWHQPKGMAEEAAMNNKSADPMLLSH LYDSEPDWNEMEFLIKWKGQSHLHCQWKSFVELQNLSGFKKVLNYTKRVMEDVKYRKTVS REEIEVNDVSKEMDLDIIKLNSQVERVIADRISKDGYGNVVPEYLVKWKGLSYAEATWEK DVDIAFGQDAIDEYKAREAAIMVQGKSVDFQRKKSRGSLRKLEEQPEWLKGGKLRDYQLE GLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLANWAK EFRKWLPDMNVIVYVGARASREVCQQYEFYNDNKVGRTTKFDALLTTYEVLLKDKAVLSK IRWNYLMVDEAHRLKNSEASLYTTLLEFNTKNKLLITGTPLQNSVEELWALLHFLDHDKF KSKDDFVQNYKNLSSFNEMELANLHKELRPHILRRVIKDVEKSLPPKIERILRVDMSPLQ KQYYKWILERNFQDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDANYFGSS KLERIILSSGKLVILDKLLDRLHETKHRVLIFSQMVRMLDILAEYLSIKGFQYQRLDGST KSELRQQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA HRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGKLEKKETKKGSLFD KNELSAILRFGAEELFKEDKNDEESKKRLLSMDIDEILERAEKVEEKGAEAEEGKELLSA FKVANFCGAEDDATFWSRWIKPEATAHAEDALAPRAARNKKSYAEASPLVVTNKRKKGGD AQERFPKRRKGDFSCTLPAIDGASAQVRGWSFGNLSKRDATRFSREVKKFGNDSQIDLIS SEVGGAVEAAPTEAQVELFDSLIDGCREAVKGEVVDPKGPLLDFFGVPVKADELLGRVEE LQLLAKRISRYADPVSQFRALAYLKPATWSKGCGWNQKDDARLLLGIHYHGFGNWEKIRL DEKLGLMKKIAPVELQHHETFLPRAPQLKERASQLLQMEVAAVGGKNTSLKVGRKTSNKQ KESLPSTTASLGKGKQSKLSSSGNAKMGRGRAAKGQKKVEPLIKEEGEMSDNEEVYEQFK EVKWMEWCEDVMVYEEKTLKRLQRLQTTSADLPKDKVLAKIRNYLQLLGRRIDEIVFEYE NESHKQERMTVRLWNYVSTFSNLSGEKLRQIYSKLKQEQHVEGRVGPSQFNGSAPAHPTP GFIPRGFDAAKFEAWKRRKRAEADVHSQVQPQHQRALTNGTRLPEPNLSSGILGAAPLDS KQSGNGRPYRTHQSGLPQRPGFSSGPR NT seq 5124 nt NT seq  +upstreamnt  +downstreamnt atggctttctataggaattattcgaatgaaaccgtaacgctggatgacaaaagccaaggg gaacaaagtatgcagggaatacatcaggatgtaggaaacgaggaagtggaaggtagtctg agtgaaaatgatgataatggtcagttacaagatgaggttggtgtagaagtggaaacaact gcagaggatcaggtgccgcctggaagaggagttaatttgtccgggaaatggggttctggg ttttggaaggattgtcaaccgatgggcccctcaggtaggtccggttctggtgaagagtcg aagagtggatcagagtataagaatgaggaggaatctgatgaggtatctgatggtagggaa gatcagttggagtcggaagatgaaggaaggcagaaagaaatggggaagagtcgaagtgtt ccggctgatgagatgttatctgatgaatattatgaacaagatggtgatgatcagagtgac tcattacattacagagctgcaaacccttcaagcggttatagttcaaagctgcagtcaagg cctgtttctgccagcaagtatgcaagtcggaaggcaaaagcttcaaaagatcaggaagat aacgagtatgctgattacgaggatgacgacagtgaggatgaagatgatccagatgatcct gactatggtagcacaggccgtggaaagggcatcaaggacaaggatgatgactgggagggt ggagagtctgatgaggtcaacagtgacgatgatgaggtgggcatctccgatgaagatgaa gaatattacagaaaaccccaaggcaagcaaaagaataggggtgggcatagtgtaaaatct accagagtagttaggtctcttgctacatctgctcgacagaaaaggggtagaacatcatat gaagaggaagaatcatcagaacatgattctgaaaacgagagtgatgaggattttggaaat aaacctagaagagttgcaaatctccgccttaaaaatagtggtagatcttctgctgctagt gtatctggcaggaatagtgaaatccgaacttcgagtcgtcggtcggttcggaaagtttca tatgcagagagtgaagaaagtgaagaaatcgatgagagcaagcaaaagaagggccaaaag gaagaacttgaagaggaagattgtgactcaattgagaaagttttatggcatcagccaaag ggcatggctgaagaagctgcaatgaataacaaatcagctgatcctatgttgttgagtcat ttgtatgactctgaaccagattggaatgagatggagttcttgataaaatggaaaggccag tctcatttgcattgtcaatggaagtcatttgttgagctacaaaatcttagtgggtttaag aaggttttgaattacactaaaagggtcatggaggatgtgaagtataggaagactgtatcc cgcgaggagatcgaggtaaatgacgtgagcaaggaaatggacttggatattatcaaactg aacagtcaggttgagagagttattgcagacagaatcagcaaagatggttatgggaatgtg gtgccagaatatttagttaaatggaaagggctgtcttatgctgaagcaacttgggagaag gatgttgatattgcttttggtcaagatgccatcgatgagtataaggctcgtgaggctgcc attatggtacaagggaaatcagtggatttccagcgcaaaaagagcagaggtagtttgagg aagcttgaagagcagcctgaatggttaaagggtgggaaacttcgagattatcagcttgaa ggcttaaattttctggttaatagttggaggaatgatactaatgttatattagctgatgaa atgggcctcggcaaaactgttcagtcagtttcaatgctcggttttcttcagaatgctcag caaattcatggaccatttcttgttgttgtcccattatcaactcttgccaattgggcaaaa gaatttaggaaatggctgcctgatatgaacgttattgtctatgtcggagcacgtgcaagt cgtgaggtctgtcaacaatacgaattctacaatgataataaagttggcaggactaccaaa tttgatgcactgcttactacttatgaggtgctattgaaggacaaggctgtgctttcaaag ataaggtggaactaccttatggttgatgaagcgcacaggctaaagaacagtgaggcttct ctttatacaacacttttggagttcaacacgaagaacaagttgcttattactggtactcca ttgcagaacagcgttgaagaactatgggccttactccactttcttgatcatgataagttc aagagcaaggatgattttgttcagaattataagaatcttagttcatttaatgaaatggag cttgcgaatcttcacaaggaattgaggcctcacattctcaggagggtcataaaagatgtg gagaagtcacttcctccaaagattgaacgaatacttagggttgatatgtcaccactacag aaacagtattacaaatggatcttggaaaggaattttcaagacttgaataaaggtgttcgt gggaatcaggtttcacttttaaatattgtggtggagttgaagaaatgttgcaatcacccc tttttatttgaaagtgcggaccatggttatggcggggatgcaaattattttggcagctca aaattggaaagaattatacttagcagtggtaagcttgttatacttgacaagctgctggac agattgcatgaaacaaagcatcgagtgttgatattttctcagatggtgaggatgctggac atactggcagaatatttgtctataaaaggattccaatatcagcggcttgatggtagtaca aagtctgagttgcgccagcaggctatggaccacttcaatgcacctggtagtgaagatttc tgttttcttctgtcgacccgagctggtggattgggtataaatcttgcaacagcagacact gttatcatatttgattctgattggaatccccaaaatgacttgcaggcaatgagtagagct cataggataggacaacaagaagttgtcaacatctacagatttgttacaagtaaaagtgtg gaggaagatatcttggaacgtgctaagaagaagatggttcttgatcatttggtgattcag aaactgaatgcagagggtaaattagagaagaaagaaaccaagaaaggaagtctctttgat aagaatgagctctctgccatcttgaggtttggggctgaggaactatttaaggaagacaaa aatgacgaagaaagcaagaaaaggcttctcagtatggatattgatgaaattcttgaacgg gctgaaaaggttgaagagaaaggagctgaggcagaggaaggaaaggagttgctgagtgct tttaaggttgccaatttctgtggtgctgaagatgatgcaactttttggagtcgatggata aagccagaagcaactgcacatgctgaagacgctttggctcctcgagctgctcgaaataaa aagagttatgcagaagctagcccgctggtggttactaataaaaggaagaagggtggtgat gctcaggaaaggttcccaaagcgtcgcaagggagattttagctgcacacttccggcaatt gatggtgcttccgctcaagtgagaggatggtcttttgggaacttgtcaaaaagagacgcc acacgtttttctcgtgaggtcaagaagtttgggaatgatagccaaattgacttaatatca tcagaggttggtggggcagttgaagctgcaccaactgaagctcaagttgagctttttgac tcattgattgatggctgtagagaagcagttaaaggtgaagttgttgatccaaagggacct cttttagatttttttggtgttcccgtgaaggctgatgaactattgggccgtgttgaggaa cttcaactcctagcaaagcgcatttctcgatatgcggatcctgtctcacagttccgtgct ttggcttatctaaagcctgcaacttggtctaaaggttgtggctggaaccagaaggatgac gccagactgcttcttggaattcattatcacggatttggcaactgggaaaagatacggtta gatgaaaaacttggcctcatgaagaagattgctccagtggaattacaacatcatgagact ttcttgccaagagctccacaattgaaggagagagcttctcaacttctgcaaatggaagtt gcagctgttggtgggaagaacactagtttaaaagtgggccgtaaaacttccaacaagcag aaggaaagccttcccagcaccacagcatctcttggaaagggtaaacaaagtaaattaagc tcatctggaaatgctaaaatgggtagaggcagagctgcaaaaggtcaaaaaaaggttgag ccgttgatcaaagaggaaggtgaaatgtcagataatgaagaagtttatgagcagtttaaa gaggtgaaatggatggaatggtgtgaagatgtgatggtgtacgaggaaaagacgcttaag cgtcttcaaagattgcagactactagtgctgatctccccaaggacaaggtgttggccaaa atacggaactacttgcagcttcttggtcgcaggattgatgaaatagttttcgaatatgag aacgaatcacataagcaagaaaggatgacagtccgtttatggaattatgtctcgacattt tcaaatttgtctggggagaagcttcgtcagatttattctaaacttaagcaggagcaacat gtagaaggacgggtaggaccgtcacaatttaatggttctgcacctgcgcatccaacgcca ggttttatacctcgaggttttgatgcagccaaatttgaagcatggaaacgaaggaaaaga gctgaagctgatgttcattcgcaagttcagccccaacatcaaagagctttgactaatggt acacgccttcctgaacccaacttatcatcagggattcttggcgcagctcctttagatagc aaacagtcaggtaatggtaggccttacagaacacatcaatctggcctgcctcagagacca ggtttctcgtccggtcccagatag

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