Solanum pennellii: 107007213 Help Entry 107007213         CDS       T04130                                  Name (RefSeq) protein PAT1 homolog   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism spen  Solanum pennellii Pathway spen03018   RNA degradation Brite KEGG Orthology (KO) [BR:spen00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     107007213  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:spen03019]     107007213 Messenger RNA biogenesis [BR:spen03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      107007213   mRNA degradation factors    5'-3' decay     Decapping complex      107007213 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  107007213 NCBI-ProteinID:  XP_015061219 UniProt:  A0ABM1FSU3 LinkDB All DBs Position 12:complement(6848825..6860721) Genome browser AA seq 817 aa AA seqDB search MDGFEGGGGSSRSFMEFGDNRPAEEKFDASQYAFFGNDVVEEVELGGLEDEEDDSLPPVG FDDEEYQLGREEGGAFGSLSEIDDLSNTFSKFNKDDGGAIRPGFIGDREYRESSSAVEWS QDAEFRNWIDRKALDGGEINDSKRWPSVPYSSAAHLLESNTLYRTSSYPEQQQQHEYQQQ TLNHHYSSEPGLIPELPFPSFPPSARHPQASANNQLRNPNGPNHPGGQQMPVSSPNFSPF LNTANQLTASHLGPQYGGKFAQGTPAGLPLHNQIPSQWLKQSTLYPGEQSSMTSNMMPQQ SHRQNGFAPPHGGLQLPQQPGQQHPLHPPYGRLPGLQSQLINHHMSPPSQMMNNFDMLGL ADLRDQKAKLMLRGRQGMHYPQLGFDISSQRNVSAWPRFRSKYMSTDELENILRAQLAAT HSNDPYVDDYYHQACLAKKSAGAKLKHHFCPNNLRDGSARSRANTDPHPFLQVDALGRVA FSSIRRPRPLLEVDPPKSSATGCIEQKMSEKPLEQEPMLAARVTIEDGLSLLLDVDDIDR FLQFNQLPDGGDQLKRRRQVLLEDLASSLQLVDPLGKSVHTVNLAAKDDVVFLRIVSLPK GRKLLVRYLQLLFPGSELTRVVCMAIFRHLRFLFGGIPSDHGATETTVNLGRTVSLCICE MELKALAACLASVVCSAEPPPLRPVGSPAGDGASVVLKSILERATELLRDPHAAGKCSMP NRAFWQASFDAFFGLLTKYCFSKYDTVMQCFLTQGPPDVAVSGSDAAKAISREMPVELLR ASLPHTSEQQRKVLLEFAHRSMPVLGVGSQSGGSGGT NT seq 2454 nt NT seq  +upstreamnt  +downstreamnt atggacggatttgaaggcggtggtgggagtagtaggagttttatggaattcggtgacaac cgacctgcagaagaaaaatttgatgcttcgcagtatgcattctttggtaatgatgttgtt gaagaagttgaactgggaggattggaagatgaagaggatgatagtcttcctccggttggg tttgatgatgaagagtatcaattaggccgagaagagggtggagcttttggatctttatct gagattgatgaccttagcaacacattttccaagtttaacaaggatgatggtggcgccata aggccaggatttattggtgatcgggaatacagagagagctcatcagctgttgagtggtca caagatgcagaatttcgtaattggattgaccggaaagctcttgatgggggtgaaatcaat gacagcaaaagatggccatcagtgccatattcttctgctgctcaccttttggaatcaaat actttgtacaggacttcctcataccctgagcaacaacagcaacatgaatatcagcagcaa accctgaaccaccactactccagtgaaccaggactcatcccagaattgcctttcccttca ttccctcctagtgcaaggcatccacaagcctccgcaaataaccagttacggaacccaaat ggtccaaatcatcccggtggacagcaaatgccagtttcctctccgaacttttctcccttc ttaaacactgcaaatcaattaactgcctcgcatcttggcccgcagtatggtggaaagttt gctcagggcacgcctgctgggcttccccttcataatcaaattccaagccaatggttgaag cagtctactttatatccaggggagcaatcaagcatgaccagtaatatgatgccccagcag tcacatcgccaaaatggtttcgcgccaccacatggggggctgcagctaccccagcaacct ggccaacagcaccccttgcatccaccctatggccgtttgccagggttgcagtctcaactt attaatcaccatatgtctccaccctcgcagatgatgaacaattttgatatgcttgggttg gctgatttaagagatcaaaaggcaaaactaatgctgagaggcagacagggcatgcattac cctcaactaggctttgacatcagtagccagagaaatgttagcgcatggccaagatttaga tccaagtacatgtcaacagatgaattagagaatattcttagagcacagctggctgctacc catagcaatgatccttatgttgatgattattatcaccaagcttgtctggccaaaaagtct gctggtgcaaagttgaagcaccatttctgcccaaataatttgagggatggtagtgctcga agtcgtgctaatactgatccacatccttttctccaggttgatgctcttggaagagttgct ttctcttctattcgcaggccccgaccacttcttgaagttgatccaccaaaatcatctgct actggatgcattgaacagaaaatgtctgagaaacccctggagcaagagccaatgctagca gctagggtgactattgaggatggactcagtcttcttctcgatgttgatgatattgaccgg ttcctacagtttaaccagcttccagatggaggagatcagttgaaacgcaggcggcaggtt ctgcttgaggatttggcctcatcacttcagctagttgacccccttggcaaaagtgtccac actgtgaatttggctgctaaagatgatgttgtcttcttgaggatcgtctcacttcccaag ggccggaaactgctagtacggtaccttcagcttcttttccctggaagtgaactgaccagg gtggtttgcatggctattttccgtcatctaaggttcttgtttggtgggattccaagtgat cacggtgcaaccgagactactgtgaaccttggaaggactgtgtcgctttgtatttgtgaa atggagctcaaagcactcgctgcttgtcttgcatcagtggtttgttcagcagagcctcct ccgctccgtcctgttggaagccctgctggagatggggcatctgttgttctaaaatctatt cttgagagggcgactgagctcttaagagatccccatgcagctggcaagtgcagcatgcct aatagggcattctggcaggcctcgtttgatgcattttttgggttactcacgaaatactgt ttcagcaaatacgacactgtaatgcaatgtttcttgacacaaggcccaccggatgtggct gttagtggatctgatgcagccaaagctattagtagggagatgcctgttgaacttttgcgt gcgagtcttcctcacactagtgaacaacagagaaaggtcctgttagaatttgcacatagg tccatgcctgtgctaggtgttggtagccaaagtgggggaagtggtggtacatga

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