KEGG   Solanum pennellii: 107007245
Entry
107007245         CDS       T04130                                 
Name
(RefSeq) splicing factor U2af large subunit A-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
spen  Solanum pennellii
Pathway
spen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107007245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spen03041]
    107007245
Spliceosome [BR:spen03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107007245
 Complex B
    107007245
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded Transformer
Other DBs
NCBI-GeneID: 107007245
NCBI-ProteinID: XP_015061258
LinkDB
Position
12:2345105..2353755
AA seq 607 aa
MDSNENGLPQITPCDTGGDNEIAGVDNGEEEHNSSKRRSSSKHSSRDYEGERESSRSRDR
EGDKGRDKDRGRSRDTDRDREKDRDRRHSYRSERHRTRGRDDDANVSDGGPESREYWQKD
YDRERDERHKHRSKSYEKEREEGHRHRSKSYDKDREERDRHRSKSYDKDREDRHGRRSHS
RGTSSRRSRSRSRSRSRSRSKSKRVSGFDMAPPTSALLSGAPALTASAGLLPGTAPAIPG
MLPNMFPLASGPLGAIPVLPVQAMTQQATRHARRVYVGGLPPTANEQSVATYFNHVMSAI
GGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGTQVKVRRPTDYNPS
LAATLGPSQPNPNLNLAAVGLSPGSTGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLR
GFNLVKDKETGNSKGYAFCVYADVSVTDIACTALNGIKMGDKTLTVRRASQGTLQPKPEQ
EIVLMHAQQQIALQRLMLQPGGPPTKVLCLTHVVSPDELKDDEDYEDIVEDMRMECGKFG
NLVNLVIPRPRSDGEPTPGVGKVFLEYADVESSSRAQQGLNGRKFGGNEVVAVFYSENKF
SEGDYEG
NT seq 1824 nt   +upstreamnt  +downstreamnt
atggattccaatgaaaatgggcttcctcagatcactccttgtgatactggtggtgataat
gaaatagctggtgtggataacggagaagaagaacataactcgagcaagagaagatcaagc
tctaagcacagttcccgtgattatgagggcgaaagagaatcttcaagaagcagagacaga
gagggggataaaggacgtgataaggacagaggtaggagcagagacacagatagagatcgg
gaaaaagatcgtgatcgtcgccacagctatcgtagcgagaggcataggactagaggtaga
gatgatgatgctaacgtttctgatggtggtcctgagagccgggagtactggcagaaagat
tatgatagagagagggacgagaggcacaaacataggtcaaaatcttatgagaaagagcgg
gaggaagggcatagacacaggtccaaatcatatgacaaggatagagaggaaagggatagg
cacagatcaaaatcctatgacaaagatcgagaggataggcacggacgcagatctcactca
aggggaacatctagtcgtaggtccagatcacgttctcgatcacggtctcgttcacgctcc
aaaagcaaaagggtcagtgggtttgacatggcacctcctacttctgctctgttatctggt
gctcctgctcttacagcttctgcaggtctactccctggcactgccccagctattcctgga
atgcttcctaacatgttccctttggcctctggaccgcttggagctattcctgttctgcca
gttcaggcaatgactcagcaggcaactagacatgcaaggcgagtttatgttggtggactt
cctccgactgcaaatgaacagtcagtggctacatacttcaatcatgttatgtcagcaatt
ggtggaaacactgccggtccaggtgatgcagtcgtcaatgtttatataaaccatgagaaa
aagtttgcttttgttgagatgagatctgtggaggaggccagcaatgccatggccttagat
ggcattatctttgagggaacacaagttaaggtcagaagaccgactgactataatccctct
ctggctgcaactcttggtccgagccaaccaaatccaaaccttaaccttgctgcagttgga
ttgtcaccaggatccactggtgggcttgaaggtcctgaccgtatctttgtgggaggcctg
ccttactatttcactgaagctcagattagggagttgctggagtcctttggccctcttcgg
gggtttaatctggtcaaagataaagaaaccggaaactcgaaaggctatgcgttttgtgtc
tatgctgatgtatcagtaactgatattgcctgtacagctcttaatggtatcaagatgggt
gataaaactcttactgtcaggcgtgcaagtcaaggtactttacagcctaagccagagcag
gagattgtattaatgcatgctcagcaacaaatagcactgcagagactcatgctacaacct
ggaggacctcctactaaagtcttatgcctaacacatgtggttagcccggatgagctcaaa
gatgatgaagactatgaagatatagtggaagatatgagaatggaatgtgggaaatttggc
aatttagtgaatttagtcatcccacgcccaaggtctgatggtgaacctacacctggggtt
ggaaaggtctttttggagtatgctgatgtggagagttcttcgagagctcaacaaggattg
aatggcagaaaattcggaggaaatgaagttgttgctgtcttttattcagagaacaagttc
tccgagggagactatgagggctag

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