Solanum pennellii: 107007248
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Entry
107007248 CDS
T04130
Name
(RefSeq) transcription factor IIIB 60 kDa subunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107007248
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
107007248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
YozE_SAM_like
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
107007248
NCBI-ProteinID:
XP_015061269
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All DBs
Position
1:93621533..93640188
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AA seq
615 aa
AA seq
DB search
MVWCVNCAQDKPTKDVEGKICCSFCGKVLEEDNFSIEPTFVKNASGQSQLSGSRVSTIQS
NYSVSRERTLKEAYEGIEGMLYGLGIDGGDSIARPALSFYTIAVEKSFTRGRRKEQVQAA
CLYIACRENKKPFLLIDFSEYLRINVYILGAVFLQLCKILHLEDHPIVQKPVDPSLFIHR
FTDRLFGGRKPNISRSALHILASMKRDWMQTGRKPSGLCGAALYIASLSHGLSCSKSEII
KVVHICEATLTKRLIEFENTESGSLTIDEFNTRAEELEKEETLAMQLYPGSKGSGITEVL
CEHKKTVKLPFAHGLCESCYTDFVKLSGGLDGGSEPPSFQRAERERLMAKQDAEEIAEDP
SFPMSSQMENNVGEYLEPEKEGNTQSVKNVHISGSEQVGAFSVVKTDHIATPDTLHDMDG
IDHDESGNFSDIDDVEVDSYLHNEQEKKYKKIIWETMNREYLEEQAAKEAAVLEAKKQHE
FILANCPEDVQKFAAATAASVAKSKKEKQQKRAAELKNTGPAQTAAEATKQMLAKKRLSN
KINYDVLEKLFDDSAPENPKKARTAYDSTDDYGVKSDKIDPEVDENYEDTFGEDFHYGED
VGGYGYDQDYDLDDY
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggtgtgttaattgtgcacaggacaagccgactaaagatgtggagggtaaaata
tgttgttctttctgtggaaaagtacttgaagaagataatttttctattgagcccactttc
gtcaagaatgcttctggacagagccaattgtcaggaagcagggtgagcactatccaaagt
aattattcagtttcacgtgaaagaacactaaaagaagcatatgagggtatagagggtatg
ctttatgggctaggaattgatggtggtgattcaatagctcgtccagctttgtccttctat
acgatagcagttgaaaagagtttcacaagggggcgtaggaaagagcaagttcaagctgct
tgtctttacattgcatgtagggagaacaaaaagccattcctactcattgacttttccgag
tacttgaggataaatgtgtacatattaggagctgtattcttacagctttgcaagatccta
caccttgaagaccacccaattgttcaaaaacctgtggatcctagcctgttcattcatcga
ttcactgatcgtttatttgggggaaggaagccaaacatttctagatctgctcttcacatt
ttggctagcatgaagcgagattggatgcagacagggagaaagccaagtggattatgtgga
gctgcactatacattgcttctctttcacatggactgagttgttctaaatcagaaattatc
aaagtggtgcacatttgcgaagcaacactgacaaagcgtttgattgaatttgagaacaca
gaatctgggagcttaacgattgatgagttcaatacaagagctgaggagcttgagaaagaa
gagacgctggccatgcaactttatccggggtcaaaaggatccgggatcacagaagtgctg
tgtgaacacaagaaaactgtgaagctgccttttgcccatggcctttgtgaaagttgttat
actgattttgtaaaactttcaggtgggcttgatggaggatctgaacctccatccttccaa
cgtgctgagagggaaagattgatggcaaaacaagatgctgaagaaattgcggaggatcca
agttttcccatgtccagtcagatggagaacaatgtcggcgagtatttggagcctgaaaag
gaagggaacacccagagtgtgaaaaatgtgcatatatcaggatctgagcaagtaggagca
ttctctgtggttaaaactgatcatattgcgactcctgatacattacatgacatggatggt
attgatcatgatgaatcaggaaacttttccgatatcgatgatgtagaggttgacagttat
cttcacaatgagcaggaaaagaaatacaagaagatcatttgggaaacaatgaatcgagaa
tatcttgaggaacaagcagccaaggaagcggctgtattagaagccaagaagcaacatgag
ttcattttagctaactgtccggaggatgtacaaaagtttgctgctgctactgctgcttct
gttgcaaagtcaaaaaaggaaaaacaacagaagagggctgcagaattgaaaaataccggc
cctgctcaaaccgctgccgaagcaacaaagcaaatgttagctaaaaagagactgagcaat
aagatcaactacgatgtgctagagaagctttttgatgattctgcacctgagaacccaaag
aaagctcgaactgcatacgattcaacagatgattatggggtaaagagcgacaaaattgat
ccagaagtagatgagaattatgaggacacgtttggcgaggatttccattacggtgaggat
gttggaggatatggctatgatcaagactatgatttggatgattattga
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