Solanum pennellii: 107007275
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Entry
107007275 CDS
T04130
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 3
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spen01009
]
107007275
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107007275
Enzymes [BR:
spen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
107007275
Protein phosphatases and associated proteins [BR:
spen01009
]
HAD phosphatases
Fcp/Scp phosphatases
107007275
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
107007275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_CPL3
NIF
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
107007275
NCBI-ProteinID:
XP_015061318
UniProt:
A0ABM1FT33
LinkDB
All DBs
Position
12:30461749..30467718
Genome browser
AA seq
1211 aa
AA seq
DB search
MEECNRVEDAEEGEISDSASVEEISEDAFNRQDPPTTSTTSKIKIASNENQNQNSTTATR
VWTMRDVYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCANGESKVIIDVD
VDDDAKEEGELEEGEIDLDSADLVVNFGKEANFIREQLQSVTLDETHKSFSMVCSKLQTS
LLALGELALSQDKNDILIQLFMTALRTINSVFYSMNDHQKQQNTDILSRLLFNAKTQLPA
LLSSEQLKELDALILSINHSPVSSNTQDNDTVNGINVVQLLDMKDSHKSSENANQDFTSV
NKYDLGDVSIKSSGLKEQSVSSESVKPGLANSKAKGLSFPLLDLHKDHDEDTLPSPTRQI
GPQFPATQTHGMVKLDLPIFPASLDKGNSLLHPYETDALKAVSSYQQKFGRSSLFVSENL
PSPTPSEEDDSGKGDTGGEVTSFDVVHNASHLNESSMGQPILSSVPQTNILDGQGLGTTR
TADPLSFLPNPSLRSSTAKSRDPRLRLATSDTVAQNTILPIPDIDLKLEASLEMIGSKKQ
KTVDLPAFDAPLPKRQRSEQTDSIIVSDVRPSIGNGGWLEDRGTAELPITSSNCATYNSD
NDIRKLEQVTATIATIPSVIVNAAENFPVTGISTSTTLHSLLKDIAINPSIWMNIIKTEQ
QKSADASRTNTAQASSSKSILGAVPSTVAVAPRSSAIGQRPVGILQTPTHTASADEVAIV
RMKPRDPRRVLHSTAVLKGGGVGSDQCKTGVAGTHATISNLSFQSQEDQLDRKSAVTLST
TPPDIARQFTKNLKNIADMISVSPSTSPSVASQTQTQCIQAYQSRSEVKGAVSEPSEWVN
DAGLASEKGSPGSLQPQISWGDVEHLFEGYSDQQRADIQRERTRRLEEQKKMFSVRKLCL
VLDLDHTLLNSAKFVEIDPVHEEILRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFL
EKASNLFELHLYTMGNKLYATEMAKLLDPKGDLFAGRVISRGDDGDPFDGDERVPKSKDL
EGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPE
DGTLASCLGVIQRIHQNFFTHRSIDEADVRNILATEQKKILAGCRIVFSRVFPVGEANPH
LHPLWQTAEQFGAVCTSQIDDQVTHVVANSLGTDKVNWALSTGRSVVHPGWVEASALLYR
RANEHDFAIKS
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatgtaatagagttgaagatgcagaggagggtgagatctcagattcggcttca
gttgaagaaatcagtgaggatgcgttcaatagacaagacccacctactactagtactact
tctaagattaagattgcgagtaatgaaaatcaaaatcagaattcgacgactgcgactagg
gtttggacgatgagagatgtatataaatatccaatttctagggattatgctagaggttta
tataacctggcctgggctcaggctgtgcagaataagcctttagacgaactattcgtgatg
actagtgacaattccaaccagtgtgctaatggtgaatccaaggtaatcattgatgtggat
gtggatgacgatgctaaagaggaaggagagttggaagaaggcgagatcgacttggattcc
gctgacctagttgtaaattttggaaaggaggccaatttcattagggaacaacttcagagc
gttactctagacgaaacccacaaatccttttctatggtttgttccaaattgcaaacttca
ttactggcattgggggagctagctctttctcaagacaagaatgacattcttattcaactc
tttatgactgcactccgaaccattaattctgttttctactccatgaacgaccatcagaag
caacaaaacacagatattctatctaggttgctttttaatgcaaagacacaattacctgct
cttttgtcttctgagcagttaaaagagctggatgctctcattctctctattaaccactca
cctgtttcctcaaatactcaagacaatgacaccgtcaatgggatcaatgttgtgcaactg
ttagatatgaaggattctcataaatcctctgaaaatgcaaatcaggattttacttcggta
aacaagtatgatttaggtgatgtatctatcaaatcttcaggcctgaaggagcagagtgtg
tcatctgaatctgtaaaaccaggattagccaattctaaagccaaaggcttatcctttcct
ttgctagaccttcataaggaccatgatgaagatactcttccgtcgcctacacgacagatt
ggaccacagttccctgctacacagactcatggaatggtgaaactcgacttgcctattttc
ccggcttctcttgacaaagggaattctttattacatccttatgaaactgatgcccttaaa
gctgtttcctcttatcaacaaaaatttggtcgaagttccctttttgttagtgaaaacctt
ccaagtccaactccctctgaagaggatgatagtggcaaaggggacactggtggggaggtc
accagttttgatgttgtacataatgccagccatctgaatgaatctagcatgggacaacca
atattgtcttctgttccgcagaccaatattcttgatggacaaggactgggaactactcga
actgcagatcctctgagttttctgccgaatccttctttgcgatcttctacagcaaaaagt
agagatcccagactcagactagcaaccagcgacacagttgctcagaacacgatcttgcct
atcccagatattgatttgaaattggaggcctctctagagatgattggttcaaaaaagcag
aagacagtagacctaccagcttttgatgctccattgccgaaaagacaaagaagtgaacag
actgattcaatcattgtgagcgatgtacgtccttcgattggaaatggtggttggttagag
gatagagggactgctgagttgccaattacgagtagtaactgtgctacatataatagtgac
aatgatattaggaaattggagcaagtaacagctactatcgctactatacctagtgtcata
gttaatgctgctgagaactttccagtgaccggcattagcacgtcaacaactttgcattct
ttgttaaaagatatagctataaatccatcaatatggatgaatataatcaagacagaacag
cagaaatctgctgatgcttctagaactaatacagcacaagcttcaagttctaaatctatt
cttggagcagttccatcaacagttgcagtagctcccagatcttctgctattggccagaga
ccagtaggaatacttcagactcctacacacacagcatcagcggatgaagtggctatagtc
cgcatgaaacctcgtgatcctcggcgtgttcttcatagtactgcagttctaaagggtggt
ggcgttggatcagatcaatgtaaaactggtgtagcaggcacacacgcaacgataagcaat
ctttctttccaaagtcaagaggaccagttggataggaagtcagctgtgactctttcaact
acaccaccggacattgctcgccaattcaccaaaaatttgaaaaatatcgctgacatgatc
tccgtttcaccatccacatcaccgtctgttgcttctcaaactcagacacaatgcatacaa
gcttatcagagtagatcggaagttaagggagcagtttctgagccaagtgaatgggtgaat
gatgctggcttagcttctgaaaaaggttctcctggttcattgcaaccacagatctcttgg
ggagatgttgagcatctatttgaggggtacagcgaccaacagcgagctgatatccagaga
gaaagaactaggaggcttgaggaacagaaaaaaatgttttctgttcggaagctctgtctc
gtcttggacttggaccatactcttctgaattcagcaaagtttgttgaaatcgacccagtt
catgaagagatattgaggaagaaagaggaacaagaccgtgaaaagccgtataggcaccta
ttccgctttccacacatgggaatgtggaccaagttacggcctgggatctggaatttcttg
gaaaaggcgagcaatctttttgagctgcatctctataccatgggtaacaagctatatgcc
acggagatggccaaattgctagatccaaaaggggatctgtttgctggacgagtgatctcc
aggggtgacgatggagatccatttgatggggatgaaagggttcctaagagtaaggacttg
gagggggttttgggcatggagtcggctgttgttattatagatgattctgtgagagtctgg
ccacataacaagctaaatttgattgttgtagagaggtatatttactttccttgcagtaga
cggcaatttggtcttcctggtccttctcttcttgagattgatcatgatgaaagaccagaa
gatggcacattggcctcttgtttgggggttattcaaagaatacatcagaattttttcaca
catcggtccatagatgaagctgatgttaggaacatcttagcgacagaacaaaaaaagatt
ctggcaggttgccgtattgtcttcagcagagtgtttcctgttggtgaagccaatccccat
ttgcatcctctgtggcagactgctgaacagtttggtgctgtctgcactagtcaaattgat
gatcaggttacccatgtggttgcaaattctcttgggacggataaggttaattgggcactt
tccaccggacgatctgttgtccatcctggctgggtggaggcatcagctttactttatcgg
agggcaaatgagcatgattttgctattaaatcttaa
DBGET
integrated database retrieval system
