KEGG   Solanum pennellii: 107007283
Entry
107007283         CDS       T04130                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
spen  Solanum pennellii
Pathway
spen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107007283
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spen03019]
    107007283
   03041 Spliceosome [BR:spen03041]
    107007283
Messenger RNA biogenesis [BR:spen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107007283
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107007283
Spliceosome [BR:spen03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    107007283
SSDB
Motif
Pfam: RRM_1 RRM_7 PHM7_cyt Cut8
Other DBs
NCBI-GeneID: 107007283
NCBI-ProteinID: XP_015061327
UniProt: A0ABM1FT41
LinkDB
Position
12:complement(4577986..4580866)
AA seq 440 aa
MDQMKKRKLEDNGVGTDVPVANRLSIEDGRKILESVTPEQMVEILQNAVVRHPDVLDQVR
EIVDRDPTKRKLFVRGLGWETTTEKIRSIFGTFGELEEAVVILDKNTGKSKGYGFVTFKH
VDGALLALKQPSKHIDGRVTVTQLASAGIQGGPGGGSSNNPVDVSLRKIYVSNVPYDMQS
ERILQHFLMYGEIEEGPLGFDKATGKSKGYALFVYKTAEAAQSSLVDPVKNIDGHQLNCK
LAIDGKKKPGVGGPGGSQVQTDGHGDPMGPGQYGAPSGYGGFSGHSSYGVHGHGPNSALG
SGNGIGVGGPGGSSYGNQSVGGGYGSGIGGPYGGGSHYGGAGSAGYGGLTGSGYGGAGAV
GGAAGGLPGAGSTLGGAGRGSSMYGLPPSSAGMPSGDYPPQGSHYGPLHQPHGLQNQGPG
ASAAPRVAPGGMYQGMHSYY
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggaccagatgaagaagaggaagcttgaggataacggcgtcggcactgacgttcctgtt
gcgaataggctttcaatcgaagatggtcggaagattcttgaatctgttacacctgaacaa
atggtagaaatcttacaaaatgctgttgttcgtcatcccgacgtgcttgatcaagttcga
gaaatcgtcgatcgtgaccctactaaaagaaagctttttgttcgtgggcttggctgggaa
actacgactgaaaaaatcaggtcaatttttgggacattcggtgagttagaagaagctgtt
gttattcttgataaaaatactgggaagagcaaaggttatggatttgttacgtttaagcat
gttgatggagctttacttgcgttaaagcaaccgagtaaacacattgatggtcgagttacg
gttactcagcttgcttcagctgggattcaaggtggccctggtggtgggagttcgaataat
ccagtggatgtgtcattgaggaagatttatgtatctaatgtgccgtatgatatgcaatcc
gagaggattttacagcattttttgatgtatggggagatagaggaaggaccattagggttt
gataaggccactgggaagtcaaaagggtatgctttgtttgtgtacaagacggcggaggca
gcacagtcttcgttggtggatcctgttaagaatattgatgggcatcagttgaactgtaag
ctggctattgatgggaagaaaaagcctggtgtaggaggtccaggaggatctcaggttcaa
acagatggacatggtgatccgatgggtcctgggcaatatggtgcgcctagtggttatggt
ggattttcaggtcattcttcatatggcgtgcatggacatggtcccaattcggcattgggt
agtggaaatggtatcggtgtgggtggtcctggtggttcatcttatgggaaccaatctgtg
ggtggtgggtacggttcagggattggtggtccatatggtggggggtctcattatggtggg
gctggttcagctggatatggcgggttgaccggtagtggttatggcggtgctggggcagtg
ggaggtgctgctggtggattacctggcgctggtagtacattaggtggtgctggccgtgga
tcttcaatgtatgggttacccccaagctcagccgggatgccctcaggagattatccacca
cagggttctcattacggtcctttacatcaacctcacgggctacaaaaccaaggccctggg
gcatcagctgcacctagagttgcacctgggggtatgtaccaggggatgcattcatattac
tga

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