Solanum pennellii: 107007366
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Entry
107007366 CDS
T04130
Name
(RefSeq) serine hydroxymethyltransferase 3, chloroplastic-like
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spen
Solanum pennellii
Pathway
spen00260
Glycine, serine and threonine metabolism
spen00460
Cyanoamino acid metabolism
spen00630
Glyoxylate and dicarboxylate metabolism
spen00670
One carbon pool by folate
spen01100
Metabolic pathways
spen01110
Biosynthesis of secondary metabolites
spen01200
Carbon metabolism
spen01230
Biosynthesis of amino acids
spen01240
Biosynthesis of cofactors
Module
spen_M00532
Photorespiration
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
107007366
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
107007366
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
107007366
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
107007366
Enzymes [BR:
spen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
107007366
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Motif
Pfam:
SHMT
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
107007366
NCBI-ProteinID:
XP_015061446
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Position
12:80870211..80875243
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AA seq
527 aa
AA seq
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MEACNRAAVMGSSLQQPVWFKGSAFPLKGEVRLNGVRLWSVKPCKASQLDGSLVSGRPPS
SVSVPIPEMGGAGNNFVDYGLGEADPEVRGIIDKEKERQFRSLELIASENFTSRAVMEAV
GSCLTNKYSEGLPGKRYYGGNEYIDELEILCQERALAAFNLDGKQWGVNVQPLSGSPANF
EVYTAVLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESSGLVDYDM
LEKTATLFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVANPF
EYCDIVTTTTHKSLRGPRGGMIFFKKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLAV
CLKHAKSPDFKAYQNKVVSNCRALASRLTELGYKLVSGGTDNHLVLVDLRPLGTDGARVE
KILDMASITLNKNSVAGDKSALVPGGIRIGSPAMTTRGFSEKEFVTVADLINEGVQITLE
AKNLVSGSKLQDFMKFVTSPEFPLIDKVLDLQRRVEALTIQYPLPGL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggaggcttgtaacagagctgcagtgatgggttcttctcttcagcaacctgtttggttt
aagggatcagctttccccttaaagggtgaagtgagacttaatggggtcagattatggtct
gttaagccttgcaaagcctctcaacttgatgggagcttggtttcaggaaggcctccttct
tcagtttctgttcctatcccagaaatgggaggtgctgggaacaactttgtagattatgga
ttgggtgaagctgatcctgaagtccgtggtattattgacaaagagaaggaacgtcaattt
cggagcttagagcttattgcctctgagaatttcacatctcgagcagtgatggaggcagtg
ggttcttgccttacaaacaaatactccgaaggactaccaggcaaaagatattatggtgga
aacgagtacattgatgagttagaaatactctgtcaagagagggctttggcagcctttaac
ttagatgggaaacagtggggtgtcaatgttcaacccctatctggttctccagcaaatttt
gaagtctacacagcagttctcaatccacatgaccggattatgggattggacttgcctcat
gggggtcatttgtcccatggattcatgactcctaaaagacgagtttcaggcacatctatt
tactttgagtccatgccttaccgccttgatgaatcttcaggccttgttgattatgacatg
cttgagaaaactgcaaccctttttcggccaaaacttattattgctggtgctagtgcatat
ccacgagattttgattatcctcgcatgagaaagatagcagatgctgttggagcctttctc
atgatggatatggctcacatcagtgggcttgttgccgcctctgtagttgctaatccattt
gaatactgtgacattgttaccacaacaactcacaagtctctaagaggtcctagaggagga
atgatcttcttcaagaaagatcctgtcctaggcgttgatttggaatctgccatcaacaat
gctgtttttcctggcttgcagggtggtccacacaatcacacaattggaggactagctgtt
tgcttgaagcatgccaaatcacctgatttcaaggcttatcagaacaaggtggtctctaac
tgtagagctcttgcaagccggttaacggagctggggtacaagctggtctctggaggaact
gacaatcatttggtcctagttgatctcaggcccttgggtactgatggtgctagagtggag
aaaatacttgacatggcatcaatcacgctcaataagaattcagtagccggtgataaaagt
gcactagtgcctggtggtatacgcataggctcacctgcaatgacaactcgaggtttctca
gagaaggaatttgtaaccgttgcagaccttattaacgagggtgtgcagataactcttgag
gccaagaacttagtctctggttctaaactccaagacttcatgaagtttgttacttcaccg
gagtttcctttgatcgataaggtgctggatctacaaagaagagttgaagctttgacaatc
caatatccattgcccggcttgtga
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