Solanum pennellii: 107007383
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Entry
107007383 CDS
T04130
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spen01002
]
107007383
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107007383
Enzymes [BR:
spen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107007383
Peptidases and inhibitors [BR:
spen01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107007383
Ubiquitin system [BR:
spen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107007383
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
zf-HIT
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
107007383
NCBI-ProteinID:
XP_015061471
UniProt:
A0ABM1FTF9
LinkDB
All DBs
Position
12:complement(81235441..81243527)
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AA seq
643 aa
AA seq
DB search
MGLPSACAVCGNATSKRCSRCKMVNYCSDACQRSDWNSGHKYGCRDFQSSVKGNSEQSAS
TLQRRYMFGTSFVPFGGKNNQELFPYEEFLNYFYWGGSGYPPRRLINCGNSCFANVVLQC
LTQTRPLLAYLLERGHRRECRSNGWCFLCEFQLHVEQCTWCQDPFSPIDVLSGLPNIGGN
LSCGKQEDAHEFMRFAIDTMQSAVLAEFDGDKAEPLSAEETTIIQHIFGGRLQSQVACTA
CGNHSNQFENMMDLTVGINGEADSLEKCLDQFTAEECMDGEDMYKCDRCNDYVKAWKRLT
ILEAPNILTIALKRFKSGDTPGKLNNRVTFPESLDLNPNMSETGDGNDHFNLYAVIVHED
MSNALHCGHYICYIKDLTENWYRADDTEVIDVGIDDVLAQQAYMLFYSRHLARPTSLCPL
ESLNKLDKAEGKQHSTVAPLECHKTTVSPAICANPGSLPTDKKSVVFREEEELTSVTNYE
GDTVDSGASREVLQELQDVRESSADRETYLRKLSATYSFIDCCSEAVMQKAEGRCPVSDN
EEKSEMWRSAAYESLFGSSSEDEDSLTFEEYTEICEGNAHESLFESPREDSGSSSEDEDF
LTFEEYTEICEGNAHESLFESPREDSGEMPYDSSSDASDSSSS
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggggctgccgagtgcttgcgccgtctgcggcaatgccacctctaaacgatgctcccgc
tgcaagatggttaattactgttctgatgcttgccaaagatccgattggaactcggggcac
aagtatggatgtagggattttcaatcatctgttaaaggtaattctgagcaatcagcatcg
actttgcaaaggaggtacatgtttggcacttcatttgttccttttggcggaaaaaataat
caggaactttttccatatgaagaattcttgaattacttttactggggtggttcaggctat
cctcctcgtagactcataaattgtggtaacagctgttttgctaatgtggttctgcaatgt
ctaacacagactagaccacttctcgcctacttgttggagagaggccatagaagagaatgt
agatcgaatggttggtgcttcctctgcgaatttcaactccatgttgaacaatgtacctgg
tgtcaggatcccttttcaccaattgacgtactatcagggttgcctaacattggtggtaat
ctttcttgtggaaagcaggaggatgcccatgagtttatgaggtttgctattgacacaatg
caatcggcagtacttgctgaatttgatggagataaggctgaacctcttagcgctgaggaa
acaactattattcagcatatatttggtggtcgccttcaatctcaggttgcatgtacagca
tgtggtaatcactcaaatcagttcgagaatatgatggatctgactgtagggattaatggg
gaagctgattctttggagaaatgcttagatcaattcactgccgaagagtgtatggatggt
gaagatatgtataaatgtgatagatgcaatgattatgtcaaggcatggaagcgcttaacg
atcctggaggcaccaaatattctaacaatcgctttgaaaaggtttaagagcggggatact
cctggcaaactaaataatagggtgacttttcctgaaagtttagatctaaatcctaacatg
agtgaaacaggagatggcaatgaccatttcaatctgtatgcggtgattgttcatgaggat
atgtcaaatgcattacattgtggtcattatatctgctacatcaaggatttgactgagaat
tggtatagagccgatgacactgaggtcattgatgtaggaattgatgacgttcttgcacag
caagcatacatgctcttctatagcaggcatttagccaggccaacatcattatgtcctctt
gaatcattaaataaactggacaaagcggaaggcaagcagcattccacagttgcacctctt
gagtgccataagacaactgtgtctcctgctatatgtgctaatcctggttcattgccaact
gataagaaatcagtggttttcagggaagaagaggagttgacctcagttactaactatgag
ggtgatacggtagattctggggcaagtcgtgaagtcttgcaggaacttcaggatgttaga
gaatccagtgcagacagagaaacttatctaagaaaattatcagctacttattccttcatt
gattgttgttctgaagctgtaatgcaaaaagccgaagggagatgccctgtttctgacaat
gaggaaaaatccgagatgtggagaagtgctgcgtatgagtctctgttcggaagttctagc
gaggatgaggattctttaacctttgaagaatacaccgagatatgtgaaggaaatgcacat
gaatctctgtttgaaagtccacgagaggattctggaagttctagcgaggatgaggatttc
ttaacctttgaggaatacactgagatatgtgaaggaaatgcacatgaatctctgtttgaa
agtccacgagaggattctggtgaaatgccgtatgattcttcttccgatgcctctgactca
agctcatcttaa
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