Solanum pennellii: 107007385
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Entry
107007385 CDS
T04130
Name
(RefSeq) protein SDA1 homolog
KO
K14856
protein SDA1
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spen03009
]
107007385
Ribosome biogenesis [BR:
spen03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107007385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
SDA1_dom
Motif
Other DBs
NCBI-GeneID:
107007385
NCBI-ProteinID:
XP_015061474
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All DBs
Position
12:complement(82784183..82789788)
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AA seq
812 aa
AA seq
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MSPISGSHAPSELTAEGIAASGLTSGKLSLPTLQSKMKCDPEGYEAELTLVYNQFKSSMD
LFEQQAALNFTSLSGVSTDPTVSKDLGDRAMFLSHVTPFFPKKLVNFPKELAQLLRSSAR
TLPSGLRVHITQALILLLNRKIVDIGETLALFMELQTLGDRVLRKLAFSHIIHSIRRMNQ
KHKNDTKNRALQNILFSLLQQEDEAKAKRSLITLCELHRRRVWFDDRTANAICSACFHSS
SRIMIASLSFLLDYEKIEDDSDSDMADSEDEQTANQPQVLLNKEAIYKANNKGTSSSKKK
KQAKLQRAVRSMKKQQRMQSENNNTSYYSPLNHLKDAQGFAEKLFSRLQTCDERFEVKMM
LMKVIARTVGLHHLILLNFYPYLQRYVQPHQRDVTNLLAAAVQACHDMVPPDAVEPLFKQ
VVNQFVHDRSRPEAISVGLNVIREICLRMPLLMTEDLLQDLVLYRKKTNEKAVSASARSL
LTLFREVCPSLLVKKDRGRPTNPKARPKAFGEVSVSSSVPGIEFLDQEGSDDDVEEGSVG
LSDYDDQSDDDVNPNEEDANCEKDGDGASDNESGDDECDSDEDNKSQATEEFSEDDDAID
SALATEDDESDGEEEGIDGDIMQDNNSWASEEDDVDEKVSKGTKRKISDIDVNAASNSLR
ALKKLAGANMEPNSLNMEDGILSNEDFKRIKELKAKNDARTVLAQHGFKLPSSDQISTKR
VDAAKLEANIRKKLSKEERLAIIRAGREDRGRYQAKTALKKKKTGGSSNQQKEHQKRMPL
AAKRSKVAKSKIEKKRKQARAGKQFRGRKAWK
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgatttccggcagtcacgcgccgtcggagctgacggcggaaggaatagcagcc
tcaggtctaacatcgggaaaactaagcttaccaactctacaatcaaagatgaaatgcgat
ccagaaggatacgaagctgaactaacattagtatacaatcaattcaagtcgtccatggat
ctcttcgaacaacaagcagcactaaatttcacttcccttagcggtgtatcaactgacccg
actgtttctaaggacttaggtgaccgtgctatgtttttatcacatgtaactccgtttttt
cctaaaaagcttgttaatttccctaaagagttagctcagttgcttcgttcttcggctcgg
actttgccttctggactacgtgttcatattactcaagctttgattttactccttaatcga
aagattgttgacattggggagacacttgcattgttcatggagctccaaactctgggggat
agggttttgagaaaattggctttctctcatattatccatagtattagacgtatgaatcag
aagcacaagaatgatacgaaaaatcgggcacttcagaatattttgttttctttgctacag
caagaggatgaagcaaaagcaaaaagatcactgatcacactttgtgagcttcatcggaga
agggtgtggtttgatgatagaacagcaaatgctatatgctcggcatgctttcattcatca
tcgaggattatgattgcctctttatcctttcttcttgattatgagaaaattgaagatgac
tcagatagtgatatggcagatagtgaagatgagcagacagccaatcagcctcaggttttg
ctaaataaagaggctatttataaggcaaataacaagggtacatcatccagcaaaaagaaa
aagcaagcaaagttgcagcgtgccgtccgcagcatgaagaagcagcagcgcatgcaatct
gaaaataacaacactagttattattccccattaaaccacttaaaggatgctcagggattt
gctgaaaagcttttctcacgtcttcagacttgcgatgagaggtttgaggttaaaatgatg
ttgatgaaagtaattgcccgaacagttgggctccatcacttgattttgttgaacttctat
ccttaccttcagagatatgttcagccccatcagcgcgatgtgacaaatttgcttgctgca
gcggttcaggcatgtcatgatatggtgcctcctgatgctgttgaaccattatttaaacaa
gtagtcaatcagtttgtgcatgaccgttcaaggcctgaggctatatctgtcggactcaat
gtaatccgagaaatatgcttacgcatgcctttgttgatgacagaagatttgctacaagac
ctcgtgttgtatagaaaaaaaacgaatgagaaggccgtttctgcatcggctcgatcactt
cttactttgttcagagaggtttgcccttcacttctagttaagaaggacagagggcgccca
actaacccaaaagcaaggcctaaggcatttggtgaggttagtgtttccagcagcgttcct
ggcattgagtttctggatcaggagggcagtgatgatgatgtagaggaggggtctgttggc
ttgtctgactatgatgatcaaagtgatgatgatgttaacccaaacgaagaggatgccaat
tgcgaaaaagatggagatggtgcttctgacaatgagtctggtgatgatgaatgtgatagt
gacgaagataacaaatcgcaagctactgaagaattttcagaagatgatgatgcaattgat
agtgcattagctactgaagatgatgagagtgatggtgaagaagagggtattgatggcgat
ataatgcaggataataatagctgggcttctgaagaggatgatgtggatgaaaaggtctct
aaaggaacaaaaaggaaaatatctgatattgatgtaaatgctgctagtaatagccttcgt
gctttaaagaaattagcaggggcaaacatggaacctaactccctgaatatggaggatggt
attttatctaatgaggacttcaaaagaatcaaagaactcaaggcgaaaaacgacgcgaga
actgttttagcacaacatggatttaagcttcccagctcagaccaaattagtacaaaaaga
gttgatgctgctaaacttgaggcgaacatccgaaagaagcttagcaaggaagagagactg
gcgattattcgggctggtagagaggatagagggagataccaagctaaaactgctctgaaa
aagaagaagacgggtggttcaagcaatcagcaaaaagaacaccaaaaacgtatgccatta
gcagcaaagagatccaaggttgcaaaatctaagattgagaaaaagagaaagcaggcgcgt
gccggcaaacaatttcgagggagaaaagcttggaagtag
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