Solanum pennellii: 107007500
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Entry
107007500 CDS
T04130
Name
(RefSeq) nuclear pore complex protein NUP54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
spen
Solanum pennellii
Pathway
spen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107007500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107007500
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107007500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
107007500
NCBI-ProteinID:
XP_015061629
UniProt:
A0ABM1FTV3
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Position
12:complement(38241838..38255955)
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AA seq
388 aa
AA seq
DB search
MFGAQPSSAFGTPSFGTPSSTPAFGTPASTPAFGTPSSNPAFGTPSSTPAFGTPSTSSFG
TGFGSTLFSTPFSQQSQPHQQQQTSLFQTPQSSSPFSFSTPLNTATLAQSSPFGTSFPFA
NAQLTTQMAPVAPLPFSLADRDIQAIVDAYKEEPGNRKYAFKHLLSSVTEPQYRTKPAGV
SDIMWAEAMGKLEGMESTDRERLWPQLVHGFKDLSQRLKLQDEVIVSDAERLQMTQNNVK
MLQRHFQADTLPWIERMRHKEQGLQRRLLRVMRILEALEGKGCRLPLMKGEAELAEKLAA
ITRQLKGSGAELSRRVQNLLTICRVQNGLGSGSVYLPGSTKIHEQSLADMQEVLQQQTEA
IARLGNVLKRDIRDVEIIMAEETEMMEG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcagccctcctccgccttcggcactccatcattcggcacaccttcgtca
accccagcattcggcacacctgcgtcaaccccagcattcggcacaccttcgtcaaaccca
gcattcggcacaccttcatcaaccccagcattcggcacgccgtcaacttcatcatttggc
actggttttggatcgacactattttcaacaccattttcacagcaatcacagccacatcaa
cagcaacaaacttccttatttcaaacacctcagagttcgtcccctttcagcttttccaca
cccttgaatactgcaacactagcccaatccagtccatttggtacttcctttccatttgca
aatgcccagttgactactcagatggctcccgtggctccactccccttttctctcgctgat
agggatatccaagcaattgttgatgcgtacaaggaggagcctggtaaccgtaaatatgct
ttcaagcatcttttgtccagtgtgacggaacctcaatataggacgaaacctgcaggggta
tctgatataatgtgggcagaggcgatgggcaaacttgaaggcatggagagtactgaccgt
gagcgcctgtggcctcaacttgtacacggcttcaaggatctttcccaacggctcaagctt
caagatgaagtcatagtttcagatgctgagaggctgcaaatgacgcagaacaatgtgaaa
atgttgcaaaggcattttcaagctgatacccttccttggattgaaagaatgagacacaaa
gagcaaggtcttcaaagacgccttttgagggtgatgagaatactagaggcacttgaaggt
aaaggttgtcgattgcctttgatgaaaggagaagctgaattggcagagaagttggcagcc
atcacgagacagttaaaaggttctggagcagaactttctaggagggttcagaatctgctc
accatatgtcgtgttcaaaatggccttggaagtggttctgtttatctccctggctcaact
aagatccatgagcagagtcttgctgacatgcaggaggttttgcaacagcaaaccgaggct
attgctaggcttggtaatgtattgaagagagatattcgagatgtggagatcattatggcc
gaggaaacagaaatgatggaaggctga
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