Solanum pennellii: 107007539
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Entry
107007539 CDS
T04130
Name
(RefSeq) TBC1 domain family member 17-like
KO
K20168
TBC1 domain family member 15
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107007539
Membrane trafficking [BR:
spen04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107007539
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
107007539
NCBI-ProteinID:
XP_015061689
UniProt:
A0ABM1FTZ9
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Position
12:complement(3142304..3154474)
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AA seq
656 aa
AA seq
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MHEIDVHDLSDDADYAASVQQGSASMNRSNSSKQGSSGEQEGAEIVYVKDNVAIHPTQYA
SERISGRLKLIKQGGSLFMTWIPYKGQSSSARLSEKDKSLYTIRAVPFSDVRSIRRHTPT
LGWQYVIVVLSSGLAFPPLYFYNGGVREFLATIKQHAYLVRSADDANVFLVNDFQDPLQR
TLSSLELPRAVSVTNSPSSAAASESPSSWTEGETCDRNSALAQQNARQRQKHNDPARDLS
IQVLEKFSLVTRFARETTSQLFGEAQGDSFISNDRRNHNGKTYDYPRIAESNDAQKLPED
VPVPADPLEFDKLSLVWGKPRQPPLGTEEWSAFLDSEGRVTDSEAVRKRIFYGGVEPDLR
KEVWRFLLGYYSYDSTYAEREYLVSVKKSEYETIKNQWKSISKEQAKRFTKFRERRGLIE
KDVVRTDRSVSFYEEDDSPNIKCLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMGDESE
TFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDIPLHNYFKQKDCLNYFFCFRWV
LIQFKREFEFEQTMRLWEVLWTHYGSEHLHLYVCVAILKRHRSKIIGEGMDFDTLLKFIN
ELSGHIDLDAILRDAEALCICAGENGESCIPPGTPPSLPVDDASMYYQQDDDDHML
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaaattgacgttcacgatctctccgacgacgccgattatgctgcgtctgttcag
caaggttcagcgagcatgaataggagcaatagcagtaagcagggttcatcaggtgaacag
gaaggcgctgaaatagtgtatgtgaaagataatgtggcaattcatccaactcagtatgcc
tcagagaggattagtggtcgactaaagctgatcaagcaaggaggttctctgtttatgact
tggattccatataaaggacaaagctcgagtgcaaggttgtctgaaaaagataagagtctt
tacactatacgagcagttccattttcggatgttagatcaattcgacgacacactcccacc
ctggggtggcaatatgttattgtagttttgtcttcaggactagcatttcctccgctttat
ttctacaatggcggtgtgcgggagtttcttgcaacaattaagcagcatgcttatcttgtg
agatcagccgatgatgctaatgtatttcttgtcaacgactttcaagatccactccagaga
actctctcctccttggaacttcctagggctgtttctgtaactaacagtccatcatcagct
gctgctagcgaatccccatctagctggacagagggggaaacttgtgatagaaattctgca
cttgctcaacaaaatgccaggcaaagacaaaaacataatgatcctgctcgagatttgtca
attcaagtactagagaaattttctcttgtgaccagatttgctcgtgaaacgacatcacaa
ctttttggtgaagctcagggagatagtttcatctctaatgacaggaggaatcacaatgga
aaaacatatgattatcctcgcattgccgaatctaatgatgctcagaagcttcctgaggat
gttccggtgcctgcggatcccttggagtttgacaaactgtcactagtatggggaaaacca
cggcaaccccccttgggaacagaagagtggtctgctttcctggactccgaagggagagtc
acagactcagaagcagtaagaaagagaatattttatggtggagtcgaaccagatctacgt
aaagaggtgtggcgatttctgttgggatactattcatatgattcaacttatgcagagagg
gaataccttgtgtccgtcaaaaagtcagaatatgaaacgataaaaaaccaatggaagagc
atctctaaggagcaggcaaaaagatttacaaaattccgagagaggagaggcctcattgaa
aaagatgtggtgaggactgataggtcagtttcattctatgaagaggatgacagcccaaac
attaaatgtttgcgtgatatactgctgacatactcattctacaactttgatttgggttac
tgtcagggtatgagcgatctcctttcaccaatattgtttgttatgggagatgaatcagaa
acattttggtgctttgtggcgttgatggaacgacttggaccaaactttaaccgtgaccaa
aatggaatgcactctcagctttttgcattatcaaagttggtcgagttgttggacatccct
ctgcataattacttcaaacagaaggactgcttgaattatttcttctgcttccgatgggtt
cttattcaattcaaaagggagtttgaatttgaacaaacgatgcgattgtgggaggtatta
tggacgcattatgggagcgagcaccttcatctgtatgtgtgtgtcgcgattctgaaaaga
catcgcagcaaaataataggagaggggatggatttcgacacactactgaaatttatcaac
gagctgagtggtcatatcgacctagatgctatcctcagggatgcagaggctctgtgtata
tgtgccggcgaaaatggtgaatcctgcattcctcctggaactccaccttcattaccagtt
gacgatgcttcaatgtattaccaacaagatgatgatgatcatatgttataa
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