Solanum pennellii: 107007582
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Entry
107007582 CDS
T04130
Name
(RefSeq) uncharacterized protein LOC107007582 isoform X1
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107007582
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107007582
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107007582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-rbx1
zf-RING_5
zf-C3HC4_2
zf-RING_11
zf-RING_16
APG6_N
zf_RING_Vps8
zf-C3HC4_3
RINGv
FANCL_C
Motif
Other DBs
NCBI-GeneID:
107007582
NCBI-ProteinID:
XP_015061747
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All DBs
Position
1:complement(96725078..96733387)
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AA seq
594 aa
AA seq
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MVGGNTFAKTICSICFEDLKPVVEDLQSISLCGHVFHELCLQQWFEYCTNGKKKNCPVCK
QTCTEKNTHRLFFQSVGDPNDPSLSQQPHDVEGGPPCELQNEVKRLEGKVLKLVSTLEQQ
QKDIKEVNAELFSCKEQLKVEVALKNEAKKQKTASQQLLHVKSQELDQSTLECRRLQERS
MALAKELAALKLVCDVNLGEEEVLKLASLGNQANSKETIDVLKKSLVIRNKSYKELMTKC
NTLGRGEARSLSKLEKAIEKIDKLKARVQELEMAVEARDNENLRTLRASKNFEVESGKDV
SKELKAVKCSYENQKKELADTVVHLHPVTGYGHDSRRGEKRKVMFSDVSEKDTTDRIITS
CLDQDNREKIPFQENKDGGIFETSSCMHQVSNRKLNPLVDHKKAVHENILSRLKVSSGTA
DATQVKASDNKDELSGLKNCGKNSAVNMSPVTILDDDDLLPLKDFTQGEPSFHIRKGTSA
PTSLAEIGDHCFYGGLLGPDGTNRHLGKWCKKVQNKGSTGLQGSGANSGDLISVGADGRG
GRIKVLRSINQASLDKESTESTKRCKSGTKTGSSQSQGCLQIDHFFRRAGQQHL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggtaggaggcaacacatttgccaagaccatttgttcaatatgctttgaggatctcaaa
cctgtagtcgaagaccttcaatcaatttctctttgtggccatgtctttcacgagctctgt
ctgcagcaatggtttgagtattgtacaaatggaaaaaagaagaattgtccagtttgcaaa
cagacttgtacagagaaaaacacacataggcttttttttcaatcagttggtgatccaaat
gatcctagtctttcccagcaaccacatgacgttgaaggggggcctccctgtgaattacaa
aatgaggtcaaaaggttagaggggaaagtcttaaaactggtttctactctggaacagcaa
caaaaagatatcaaagaagttaatgctgagttgttcagttgcaaagagcagttgaaagta
gaagtggctttaaagaacgaagctaaaaaacagaagacagccagtcagcagttacttcat
gtaaaatctcaggagcttgatcaatcaaccttggaatgcagacgactgcaagaaagaagt
atggccctagctaaagagcttgcagcactcaagctagtctgtgatgtgaacttgggggaa
gaagaagtcctgaagcttgcttcattgggcaatcaggccaacagtaaagagacgattgac
gtcttgaaaaagtcattggtcatccgtaacaagagttacaaagaattgatgaccaagtgc
aacacccttgggaggggggaggcgcgttctcttagtaagcttgagaaggctatagagaag
atagataagctcaaggcaagggtccaagagcttgagatggctgttgaagcaagagacaat
gaaaatttgagaactttgagagcttccaagaactttgaagttgaatctggaaaagatgtt
agtaaagaactgaaagctgtcaaatgctcatacgagaatcagaaaaaggaacttgccgat
acagtagtgcatttgcatccggtcactggctatggtcatgattctcgtcgaggggaaaaa
cggaaggttatgtttagtgatgtgagtgaaaaagataccacagatcgtatcataactagt
tgtcttgaccaagataatcgggagaaaatcccttttcaggaaaataaggatggtggcatt
tttgagacttccagttgtatgcatcaagtatcaaatcgaaaactgaatccactagttgac
cataagaaggcagtccatgagaatattttatcaagattgaaggtaagttcagggactgca
gatgcaactcaagtaaaggcatcagataacaaggatgaactctcaggcttaaagaattgt
ggcaagaacagtgcagttaacatgtcacctgtaactattcttgatgacgatgatcttctc
cctctaaaagactttactcagggtgagccctcatttcacattagaaaaggaacttcagct
ccaacttcacttgccgaaataggagaccattgcttctacggtggattattaggccctgat
ggaacaaacaggcacttgggaaaatggtgtaagaaggttcagaacaagggatctacaggg
ttgcaaggatcaggtgcaaattcaggtgatttgatttctgtgggagctgatggcagaggt
ggtaggattaaagttctccgatctataaatcaggcctctctggacaaggagagtacagaa
tcaacaaagagatgcaagtccggcacgaaaacaggtagttcacagtctcaaggatgcttg
caaatagatcatttcttcagaagggctggtcaacagcacttgtag
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