Solanum pennellii: 107007604
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Entry
107007604 CDS
T04130
Name
(RefSeq) uncharacterized protein LOC107007604
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
spen
Solanum pennellii
Pathway
spen00260
Glycine, serine and threonine metabolism
spen00400
Phenylalanine, tyrosine and tryptophan biosynthesis
spen01100
Metabolic pathways
spen01110
Biosynthesis of secondary metabolites
spen01230
Biosynthesis of amino acids
Module
spen_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
107007604
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
107007604
Enzymes [BR:
spen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
107007604
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Paralog
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GFIT
Motif
Pfam:
PALP
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-GeneID:
107007604
NCBI-ProteinID:
XP_015061773
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Position
12:81059793..81063082
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AA seq
492 aa
AA seq
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MALSLPNLFPKGDAYGTKYFEIKTKPSQLKLSFSYRARAKAALNSSSSSVEIPRQWYNLV
ADLPIKPPPPLHPKTFQPIKPEDLSPLFCDELIKQEASIDQFIDIPEEVLDVYSLWRPTP
LIRAKRLEKLLDTPARIYYKYEGGSPAGSHKPNSAVPQAWYNKMGNVKNVVTETGAGQWG
SALSFACSLFGLNCEVWQVRASFNQKPYRKMMMQTWGAKVHPSPSDLTEAGRTILQMDPS
SPGSLGIAISEAVEVAAKNTDTKYCLGSVLNHVLLHQTVIGEECIKQMEDFGETPDVIIG
CTGGGSNFAGLAFPFIREKLKGKMNPLIRAVEPTACPSLTKGVYAYDYGDTAGMTPLMKM
HTLGHDFIPDPIHSGGLRYHGMAPLISHVYELGFMEAISIPQIECFQGAIQFARSEGLIP
APEPTHAIAATIREALRCKETGESKVILMAMCGHGHFDLSSYDKYLQGSLVDLSFSEEKI
KASLAKIPQPVS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcactatccctcccaaatctgtttccaaaaggtgatgcgtatggaacaaagtatttt
gagattaaaacaaagccaagtcaattgaagctttcgtttagctatagagcaagagcaaag
gcagctcttaattctagttcgagttctgttgaaatccctcggcagtggtacaatctagtt
gcagaccttccaatcaaaccacctccaccgctgcatcccaagacgtttcagcctatcaaa
ccggaggacttatctccgcttttctgtgatgagttgattaaacaggaggcaagcatcgac
cagtttattgatataccagaagaagttttagacgtctacagtctttggcgcccaacccct
ttgattagagcaaagaggttggaaaaactgcttgatacacccgcacgaatatattacaag
tatgaaggtggtagccccgcggggtcgcacaagcccaactctgctgttcctcaggcctgg
tacaataaaatggggaatgttaaaaatgtggttacggagaccggggcaggtcaatggggg
agcgcgttgtcgtttgcttgcagcttatttggtctcaattgtgaggtatggcaagttcga
gcttcgtttaatcagaaaccttatcgtaaaatgatgatgcaaacttggggtgcgaaggtg
catccttctccttccgaccttacagaggccggtcggaccattctacaaatggatccttca
agtccaggaagtttaggaatagctatttcagaggctgtggaggttgcagcgaagaacact
gacaccaagtattgtttgggaagtgtactcaatcatgttttgttacatcagaccgttatc
ggtgaggaatgtataaaacagatggaggatttcggagagactccagatgtgatcatcggt
tgcacgggaggtggatctaattttgcaggacttgctttcccgtttatccgggagaagctt
aaggggaaaatgaatcctcttattagagcggttgaacctacagcttgcccctcgttgacg
aaaggtgtatatgcttacgactatggagacaccgcaggcatgactcctttaatgaaaatg
catacacttggtcatgacttcataccggatcccatccattccgggggtctccgttaccac
ggcatggcaccattgatatcacacgtctatgaactcggattcatggaagcaatatcaatt
ccgcagattgaatgtttccaaggtgctattcagtttgcgaggtctgaggggttgatacca
gcaccagaaccaacgcatgctatagccgctactataagggaagctctaagatgtaaagag
accggagaatcgaaagttatactcatggcaatgtgtggacatggacattttgatttgtca
tcttacgataagtatttgcagggaagcttggttgatttgtcattctcagaagagaaaata
aaagcctcactcgcgaaaataccacaaccagtatcataa
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