Solanum pennellii: 107007618
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Entry
107007618 CDS
T04130
Name
(RefSeq) probable beta-1,4-xylosyltransferase IRX10L
KO
K20870
putative beta-1,4-xylosyltransferase IRX10 [EC:2.4.2.-]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
spen01003
]
107007618
Glycosyltransferases [BR:
spen01003
]
Polysaccharide
Structural polysaccharide
107007618
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GFIT
Motif
Pfam:
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
107007618
NCBI-ProteinID:
XP_015061793
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Position
12:56814171..56823264
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AA seq
416 aa
AA seq
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MRNWRWGFLLLLHFAFLLGTEAFKFHKTQRTERISGSAGDVLEDDPVGRLKVFVYELPSK
YNKKILQKDPRCLSHMFAAEIYMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPL
PFKSPRMMRSAIQLIASNWPYWNRTEGADHFFIVPHDFAACFHYQEEKAIGRGILPLLQR
STLVQTFGQRNHVCLKDGSITIPPYAPPQKMQSHFIPPDIPRSIFVYFRGLFYDVGNDPE
GGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAIFCLCPLGWAPWSPRLVEAVI
FGCIPVIIADDIVLPFADAIPWEEIGVFVAEKDVPNLDTILTSIPPEEILRKQRLLANPS
MKQAMLFPQPAQSGDAFHQILNGLARKLPHDRTVFLTPGEKILNWTAGPVGDLKPW
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaggaattggagatggggttttcttttgcttcttcattttgctttcttgttaggaact
gaagccttcaaatttcataagactcaacgtactgagagaatctcaggtagtgctggtgat
gtcttggaagatgatcctgttgggaggttaaaagtttttgtatatgagcttcccagtaaa
tacaacaagaaaattcttcagaaagacccacgatgtctcagtcacatgtttgctgcagag
atctatatgcatcggttcctcttatctagccctgtacgaacccttaatcctgaggaagct
gattggttctacacccctgtttacaccacttgtgacctgacaccaaatggccttccttta
cccttcaagtcaccacgaatgatgaggagcgcaatacaacttattgcttctaactggcct
tattggaataggacagagggtgctgatcacttcttcattgtcccacacgattttgctgct
tgttttcattatcaagaggaaaaagctattgggaggggaattcttccgttgctccagcgt
tcaactttagttcaaacttttggacaaagaaatcatgtgtgtttgaaggatggttcaatt
acaattcctccctatgctcctccacagaaaatgcaatcccacttcatccctccagatatt
ccgcgatccatctttgtttacttccgtggcttgttctatgatgtaggaaatgatccagaa
ggtggttattatgcgagaggtgcccgggcagcagtatgggagaactttaaggacaatcct
ctctttgatatttccacagagcatccaactacctactacgaggacatgcaacgagccatc
ttttgcttgtgcccacttgggtgggcaccatggagcccaagattggttgaagcagttata
tttggatgcatccctgttatcattgcagatgatattgtcttgccatttgctgatgcaatc
ccctgggaagagattggtgtttttgtagccgagaaggacgttccaaatttggatactatt
ctcacttctattccaccagaggaaatattgaggaagcagagattacttgctaacccttca
atgaaacaggctatgttgtttccacaacctgctcaatcaggtgatgctttccatcaaatt
ttgaatggacttgctcgtaaactgccacatgacagaaccgttttcttgactcctggggag
aagatcttaaactggactgctggtccagttggtgacctaaaaccttggtaa
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