Solanum pennellii: 107007632
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Entry
107007632 CDS
T04130
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spen03036
]
107007632
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
107007632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_22
AAA_16
AAA_18
Viral_helicase1
nSTAND3
AAA_14
NPHP3_N
NACHT
ATPase_2
AAA_28
Cytidylate_kin
AAA_30
TIP49
AAA_2
RNA_helicase
TsaE
AAA_5
AAA_11
RuvB_N
KAP_NTPase
bpMoxR
ABC_tran
DUF815
AAA_24
AAA_33
ResIII
AAA_17
AAA_7
Rad17
PduV-EutP
IstB_IS21
SLFN-g3_helicase
AAA_19
AAA_3
Mg_chelatase
nSTAND1
NB-ARC
CPT
NTPase_1
Motif
Other DBs
NCBI-GeneID:
107007632
NCBI-ProteinID:
XP_015061808
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Position
12:complement(72916449..72954544)
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AA seq
454 aa
AA seq
DB search
MSAPMEISMVNSAEVNTSEQNGDPSPLPSPTLPEEKVLVSVEVCLKPSSTARIDDVRLSV
ERMLEKRSMSYVDGPIPVPIDDLFLAENVLHICVCDTDVWLENRDILLFWQVKPVVHVFQ
LSEEGPCEELSGDGQLSTFNEWILPAKEFNGMWESLIYESGLKQRLLRYAASALLFTEKR
VNSFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFSFRYPRSQLVEVNAHSLFSKWFS
ESGKLVAKLFSKIEEMVEEETNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQ
LDKLKSAPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELLRTGI
LSNSQDGGCLVLPSYASLKEKMSEVVSTESQMFPHLGKQLLEAAEACEGMSGRSLRKLPF
LAHAALANPYSCEPGKFLHVMMQTAKRERSELSE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctccaatggaaatctccatggtcaactctgctgaagtcaacaccagcgagcaa
aacggtgacccttctccattgccatcacccacattacctgaagaaaaagtgctcgtttca
gttgaagtttgcttgaagccttcaagtacagctcgtattgatgatgttaggttatccgtt
gagagaatgctggaaaaaaggagtatgagctatgtggatggtccaattccagttccgatt
gatgatctctttcttgctgaaaatgtgctacacatatgtgtgtgtgacacagatgtctgg
ctggagaaccgagatatccttctattctggcaagtaaaaccagttgttcatgtatttcag
cttagcgaggaaggaccatgtgaagaattaagtggggatggacagctttctacatttaat
gaatggattcttcctgcaaaagaatttaatggaatgtgggaaagcttaatatacgaatct
ggtctcaagcaaagattgttgcgatatgctgcaagtgctttgcttttcactgaaaagaga
gtaaattccttccttgtatcctggaatcgcattattcttctgcatggacctccaggaaca
ggaaagacatctttatgcaaagcattagcacaaaaactttccatacgttttagctttaga
tacccaaggagccaattggtcgaagtcaatgcacattcattgttcagtaaatggttttct
gaaagtggcaagctggttgcaaagctgttctcgaagatcgaagaaatggtagaggaagaa
accaatctggtatttgttttgattgatgaagttgaaagcctcgccgctgctagaaaagct
gctttgtctggctctgaaccttcagattctatcagggtagtgaacgctctgttgacccag
cttgacaagttgaagtccgcgccaaatgtcataattctgactacgtccaatatcactgct
gccattgatatagctttcgtggatcgtgctgacattaaggcttatgttggaccacctacg
cttcaagcacgttatgagatactccgatcatgcttgcaagagctattgcgtactggaatt
ttgtcaaattcgcaggatggaggttgccttgttcttccaagttatgctagtttgaaggag
aagatgagtgaagtagtttcaactgagtctcaaatgtttccacatcttggtaaacaattg
cttgaagctgcagaggcctgtgagggtatgagtggaagatcacttagaaagctaccattc
ttggcacatgctgcacttgctaatccttacagttgtgaacctggcaaatttttgcatgta
atgatgcaaacagctaaaagagagcgttcagagctgtctgagtga
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