Solanum pennellii: 107007730
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Entry
107007730 CDS
T04130
Name
(RefSeq) long chain acyl-CoA synthetase 2 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spen
Solanum pennellii
Pathway
spen00061
Fatty acid biosynthesis
spen00071
Fatty acid degradation
spen01100
Metabolic pathways
spen01212
Fatty acid metabolism
spen04146
Peroxisome
Module
spen_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
107007730
00071 Fatty acid degradation
107007730
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107007730
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spen01004
]
107007730
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107007730
Enzymes [BR:
spen01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
107007730
Lipid biosynthesis proteins [BR:
spen01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
107007730
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of breast milk
107007730
Exosomal proteins of breast cancer cells
107007730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
107007730
NCBI-ProteinID:
XP_015061960
LinkDB
All DBs
Position
1:complement(107010483..107015690)
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AA seq
659 aa
AA seq
DB search
MSNYTVKVEESRPASDGKPSAGPVYRNIYAKDGLMEMPTRFKSPWDFFSESVKKNPKNQM
LGRRQVVDKKAGPYSWLTYEEVYETTIKIGSAIRNRGVNPGDRCGIYGVNCPEWIMAMEA
CNSQAISYVPLYDSLGANAVEFIINHAEVSIAFAQESKIPAILSCLSKCNSYLKTIVSFG
NISSTQKSEAEEQGVACFSWEEFIQMGSLDHELPQKRKTDISSIMYTSGTTGEPKGVILT
NGAFMGEVLSMDQLLVETDKEGTGEDVYFSFLPLAHIFDQIIETYCIYRGASIGFWQGDI
RYLIEDLLVLKPTIFCGVPRVYDRIYTGVMDKIKAGGTLKKLLFQFAYNYKLRNMEKGLR
QDEAAPRFDRLVFDKIKLAFGGRVRLMLSGAAPLPKHVEEFLRVTCCCSLSQGYGLTESC
GGCLTSIANVHSMTGTVGVPMTTIEARLESVPEMGYDALASVPRGEICLRGKTLFSGYHK
REDLTKSVLVDGWFHTGDIGEWQPDGAMKIIDRKKNIFKLSQGEYVAVENIEGVYSRCPI
VTSIWIYGNSFESFLVAVVVPERKALEDWASNNQETGDFSSLCNNTKARKYILDELNTTA
RKHQLRGFEMLRAVHLEPNPFDIERELVTPTFKLKRPQLLNYYKDIVDQLYKEAKAKTA
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattatacagtgaaagttgaagaaagccggccagcttctgacggaaagccgtca
gcagggccagtttataggaatatttatgcgaaagatggtctcatggaaatgcctactcgt
tttaagtcaccttgggacttctttagtgaatcagttaagaagaatcctaaaaatcaaatg
ctgggccgccgtcaggttgttgacaaaaaggcaggtccctacagttggctaacatatgag
gaggtttatgaaaccacaattaagattggttcagccatccgaaatcgtggtgttaatccg
ggagaccggtgtggcatctatggtgtgaactgtcctgagtggataatggctatggaggct
tgtaacagccaagcaatttcatatgtaccactctatgattctcttggtgcaaatgcagtt
gaatttatcatcaaccacgctgaagtttcaatagcttttgcccaagaaagcaagatacct
gctatcttatcatgcttgtctaagtgcaattcttatctaaaaactatcgtcagctttgga
aacatttcaagcacacagaaaagtgaagccgaggaacaaggagtagcttgcttctcatgg
gaagagtttattcaaatgggaagtttggatcatgaacttcctcagaaaaggaaaactgat
atttcctcaattatgtacactagtggaactactggagaaccaaaaggtgtcattctgact
aatggtgctttcatgggagaagttctgtcgatggatcaacttctcgttgaaacagacaaa
gagggaacgggggaggatgtgtacttttcgttccttccactggctcatatatttgatcaa
ataattgagacatattgcatatacagaggtgcttcaataggattttggcaaggcgacatt
agatacttgattgaagatcttctggtattaaaaccgactatattctgtggagttccacga
gtttatgaccggatatacacaggggtgatggataaaatcaaagctggaggtacattgaag
aagctgctttttcagtttgcatacaactacaaattaaggaatatggagaaaggattgaga
caagatgaagcagctccgcgctttgacaggcttgtttttgataagatcaaactagcattt
ggtggacgagtacgtctgatgctttctggagctgctcctttgcccaagcacgtcgaagaa
tttctaagggtgacatgttgctgttctttatcacaaggatatgggcttactgaaagttgt
ggaggatgtctcacatccatagccaatgtacactccatgacaggaactgttggtgttcca
atgactacaattgaggcaagacttgagtcagtgccagaaatgggatatgatgctcttgca
agcgtgcctcgtggagaaatttgtctgaggggaaaaaccttgttttcggggtaccataaa
cgagaagatcttacaaaatctgtacttgtggatggatggtttcatacaggtgacattggt
gagtggcaaccagacggagcaatgaaaatcattgaccggaaaaagaatatattcaagctg
tcccaaggggagtatgtagctgtagaaaacattgaaggcgtatactccagatgccctatt
gttacatcaatttggatatatgggaacagttttgaatccttcctagtggctgtggtagtt
ccagaaagaaaggcacttgaagactgggcctcgaataatcaagaaaccggagatttttca
tctctatgtaataacacaaaggcaaggaagtacatattggatgaactcaataccactgct
aggaaacaccaacttcgaggctttgaaatgttacgtgcagttcatttggaaccaaatcca
tttgacattgagagagaattagttacccctacattcaaactcaaaagaccacaactgctc
aactattacaaggatattgtggatcaactatacaaagaagctaaggcaaaaactgcataa
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