KEGG   Solanum pennellii: 107007738
Entry
107007738         CDS       T04130                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A-like isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
spen  Solanum pennellii
Pathway
spen03020  RNA polymerase
spen03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107007738
  09124 Replication and repair
   03420 Nucleotide excision repair
    107007738
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spen03021]
    107007738
   03400 DNA repair and recombination proteins [BR:spen03400]
    107007738
Transcription machinery [BR:spen03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     107007738
  RNA polymerase III system
   RNA polymerase III
     107007738
  RNA polymerase I system
   RNA polymerase I
     107007738
DNA repair and recombination proteins [BR:spen03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107007738
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 107007738
NCBI-ProteinID: XP_015061976
UniProt: A0ABM1FUQ7
LinkDB
Position
1:99239672..99243667
AA seq 227 aa
MDVNGSAMEVDVVNVSPCLTSFVDDGTVESHRYFLARKTMLEMLKDRGFAIPNSEIDTTL
QEFREKYGQRPDVERLRISAMHRTDLTNKVLVIFCGANSVKMNVIRSILSQIMNKESLSR
LILIIENPMTSPAMKVVEDSPFKTEIFQITDLLVNITKHVLKPKHELLTNAEKEQLLKKY
NLEEKQLPRMSQKDAIARYYGLEKGQVVKVTYNNEIIETHVTYRCVW
NT seq 684 nt   +upstreamnt  +downstreamnt
atggatgttaatgggtcagcaatggaggttgatgttgtcaatgtaagtccttgtttaacc
agctttgttgatgatggtactgttgagagtcacaggtactttcttgcacgcaaaactatg
ctcgaaatgctcaaagatcgtggttttgcaatacccaattctgaaatcgacaccaccctt
caagaattcagagagaaatatggtcaaagacctgatgttgagcgcctcagaatctccgcc
atgcacagaactgaccttaccaataaggttttggtcatcttctgtggggcaaattcggtg
aaaatgaatgtcatccgcagtattttatctcaaataatgaacaaagaatccttgagtcgg
ctgatattaatcattgaaaatccaatgactagtccagctatgaaggttgtggaggactcc
ccattcaaaactgaaattttccagatcacagacttgcttgtcaacattacaaaacatgtt
ttaaagccgaagcatgagttgttgaccaacgctgagaaggagcagctattgaagaagtac
aacttggaagagaagcagctaccgcggatgtctcagaaggatgcaatagctcggtactat
ggattggagaaggggcaagttgtgaaggtcacatacaacaatgagatcattgagacacat
gttacttatcgctgtgtctggtga

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