Solanum pennellii: 107007765
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Entry
107007765 CDS
T04130
Name
(RefSeq) uncharacterized protein LOC107007765
KO
K11797
PH-interacting protein
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107007765
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107007765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
Beta-prop_SCAP
Bromodomain
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
VPS8_N
Auxin_resp
Agenet
WD_LRWD1
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
107007765
NCBI-ProteinID:
XP_015062018
LinkDB
All DBs
Position
1:79700486..79715924
Genome browser
AA seq
1697 aa
AA seq
DB search
MSFRKYIPPCDAPSGSMKSLNLSGMANQNSQPSDPQRSTEADVDIDMGEVYFLIMHFLSA
GPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGAPSGDENDDGRSFPLSYNRLVERYSHVG
KDHLVKLFKQLLLSVKAPPLGMVGGNTINAAAVPTLLGTGSFSLLSSDQDQMNNEVKPPG
HLRWPHMLADQLRGLSLREIGGGFSKHHRAPSIRAACYAIAKPSTMVQKMQNIKKVRGHR
NAVYCAIFDRSGRYVVTGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVNSNNTLVASA
SNDCIVRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSSIYQLLSSSDDGTCRIWDARYSQ
FNPRLYIPKPPETVAGKNTGPSSSTVLQSHQIFCCAFNNSGTFFVTGSSDTCARVWNACK
SNSDDSEQPNHEIEILSGHENDVNYVQFSGCAAASRFSSTDASKEDCGPKFKNSWFNHDN
IVTCSRDGSAIIWIPRSRRSHGKGGRWQKAYHLKVPPPPMPPQPPRGGPRQRILPTPRGV
NMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTDSTYVLDVHPSNPRIAMSAGY
DGKTIVWDIWEGAPIRTYEIGRFKLVDGKFSPDGTSIILSDDVGQLYILNTGQGESQQDA
KYDQFFLGDYRPVVQDTNGNVLDQETQLAPYRRNMQDLLCDAGMIPYPEPYQSMYQRRRL
GALGIEWRPSSFRFSIGTDFNMDQPYQTFPIIDLEMLIEPLPGFVDAMDWEPEIEIQSDE
SDSEYHVTEEYSSGKEHGSFCSDASANPENSDEDSEAEENQKDALRRSRRKKQKEEAEVM
TSSGRRVKRKNLDECDNSSHRSNRSRKSRHGRKAKKKSSSKSLRPQRAAARNALHLFSRI
TGTSTEGEDEYGSESDSSDSESTLQDSNNGNEDSDTSLSSERHGHSKGKEICVDHSVETN
KLQPFPNSNLNGGIRRRLVLKLPNRDPSKYGAPKNYEPGLAGPSLASKEGAEVSHHFGCE
DHNMSDANGDIREKSEIDQPTKIENHLDLLEGCKDRNIKWGGVKSRSTKRSRMGELFPSG
SETGPSSFAEGSILKENIVNGHPMLEKENHSVPPCSGIQNETNGIIHVNENHCQDSMTQN
VKLVDGTDSDHPCKQNTTPVPMRLRIRSKTLFGHLDNCDMIDAKASLEDSGCTACDTVSE
CQDTVKVLSSEAPTEVDSRTPTLDDEDREKKLDADNIGGSSGTELQVSQPVRSHDMMFTA
VYRRSKFGRSRSGREGVSGSMEATTSNVGSHSLAEGSEAVIEGVRRTRSIRLRPTTCDVN
PAHNNDRFVQSHDGSDGTSVEKTTGNNNDESSFEEKLLGSASSVGLRSTRTRRASYSARE
PSPPDRKKSYQAAKSSWLMLVAHEEGSRYIPQRGDEIVYLRQGHEEYISQNSLRDLGPWK
TIKGKIRAVEFCLIENLEFKTRPGSGESCAKMTVKFVDPASDVVGKSFQLTLPEVTGFPD
FLVERTRYDAAIERNWTSRDKCQVWWKNEGEEDGSWWEGRILNVQAKSHEFPDSPWERYV
VRYKSDPSETHQHSPWELYDADTQWEQPRIDDETREKLMSAFTKLEQSGNKAQDYYGVEK
LRQVSHKSNFINRFPVPLSLETIRARLENNYYRSLEGMKHDIEVMLSNAESYCGRNVELT
TRVRRLSEWFRRTISSL
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcggaagtatattcccccttgtgatgcaccatctggaagtatgaaatcattg
aacttatctggaatggctaatcaaaattctcagccatctgatccacaaagatcaacagag
gctgatgtggacatcgacatgggtgaagtctattttttgattatgcatttcctatcagct
gggccatgtcacagaacttatgggcaattctggaatgagcttctggagcatcaactttta
ccccgtagataccatgcttggtattcaaggagtggagcaccaagtggtgacgaaaatgat
gatgggaggtctttcccattaagttacaatagattggtggaaaggtactctcacgtggga
aaggatcacttggtgaagctctttaaacaattattgttgagtgtgaaagccccccctctg
ggtatggttggtggcaatacaattaatgcagcagctgttccaactctgctaggaactggt
tccttttcacttctcagcagtgatcaagatcagatgaataatgaagttaagcctccaggt
cacttacgttggccgcacatgctagcagatcagctgcgtggactaagtttgagagaaatt
ggtggcggattttctaaacaccatcgtgcaccatctatccgtgcggcatgttatgccatt
gcaaaaccatccactatggtgcagaagatgcaaaatattaaaaaagttcgaggacacagg
aacgcagtttattgtgcaatatttgatcggtctgggagatatgttgtaactggctcagat
gaccgacttgtaaagatttggtcaatggaaactgcatattgcttggccagctgtcgtggg
catgaaggtgatatcactgacctagctgtcaattccaacaacactttagtagcttctgct
tcaaatgattgcattgtcagagtttggcgcttgcctgatgggctgccgatttctgtgttg
cgtggtcatactggagctgttaccgcaatagcatttagtccacgacccagttctatttat
cagctcttatcgtcatctgatgatggaacatgccggatttgggatgctagatattcccag
tttaatccacgcctatacatacccaaaccgcctgaaacagttgctgggaagaacactggt
ccatcgtcaagcactgttttgcaaagccaccagatcttctgttgtgcattcaataacagt
ggaacattctttgtaactggaagctcagacacttgtgctagagtctggaatgcttgtaag
tctaattctgatgattcggagcaacctaatcatgagatagagattttatctggtcatgaa
aatgatgtaaactatgtgcaattcagtggttgtgctgctgcgtctagattttcctccact
gatgcatcaaaggaagactgtggccctaagttcaaaaactcatggtttaatcatgataac
atcgttacttgttcccgtgatggtagtgcaatcatatggatcccgagatcacgtagatca
catggaaagggtggacgttggcagaaagcgtatcatttgaaagttccaccaccgccaatg
ccacctcaacctcctcgaggcggtccacgtcaaagaattcttccaactccacgtggtgtt
aatatgattgtctggagcttggataaccgttttgtccttgctgctatcatggattgcaga
atatgcgtgtggaatgctgttgatggtagcttagtgcattctttgacgggtcatactgac
tctacctatgtacttgatgtccatccttctaatcctagaatagccatgagtgctggttat
gatgggaaaacaattgtctgggatatatgggaaggtgcacctatccgaacatacgaaatt
gggcgattcaaactagttgatggaaaattttctccggatgggacatcaataatactttca
gatgatgttgggcaattgtacatattgaatacagggcaaggagaatcccagcaggatgcc
aagtacgaccagttttttcttggagattatcgtcctgtcgttcaggatacaaatggaaat
gtccttgaccaggaaacacaacttgctccgtacaggaggaatatgcaagatctcctttgt
gatgcaggcatgattccatatccagagccataccagagcatgtatcaacgaaggcggtta
ggagctttgggaatcgagtggagaccctcatcattccgattttctattggaacagacttc
aacatggaccagccgtaccaaacttttcccatcatagacttggagatgctgattgaacca
cttccaggatttgtggatgcaatggattgggaaccagaaattgagatacaaagtgatgaa
tcagattcagagtatcatgtaactgaggagtattcttctggaaaagagcacggcagtttc
tgttctgatgcttctgcaaatccagaaaatagtgacgaagacagtgaggctgaagaaaat
caaaaagatgcgcttcgtagatcaagaaggaagaaacagaaagaagaagctgaagttatg
acatcctctggaaggcgtgtgaaaaggaagaacttggacgagtgtgacaacagttctcat
aggagcaatcgctctaggaaatcaagacatggtcgaaaagcaaagaaaaagtcttcatca
aaatctttgagaccccagagagctgctgctcgcaatgcccttcatttgttttccagaatt
acagggacatctactgaaggagaagatgaatatggttcagaaagtgattcatctgatagt
gagtccacacttcaggactcaaacaatggaaatgaagattcggatacgtccttaagtagt
gaacgacatggacattcgaaggggaaagagatatgtgttgatcactctgttgaaacaaat
aagctccagccatttcccaactctaatctcaatggtggaattaggaggagattggtccta
aaactgccaaatcgtgatccaagtaaatatggggctccgaagaattacgagcctggtcta
gctggtccatctttagcctctaaggaaggtgctgaagtgagtcaccactttggctgtgag
gatcacaacatgagtgatgctaatggtgacataagagaaaagagtgaaattgatcaaccc
acaaaaattgaaaatcacttggacctcttggaagggtgcaaagataggaacatcaaatgg
ggaggggtcaaatcccgctcaaccaagcgctctaggatgggagaattgtttccatcaggc
tctgagacaggacctagctcatttgctgagggaagcattctgaaagaaaatattgttaat
gggcacccaatgcttgaaaaggagaaccacagcgttcctccttgttcagggatccaaaat
gaaaccaatggaattattcatgtcaatgagaatcattgtcaggattctatgacacaaaat
gttaagcttgtagacggtactgacagtgatcatccatgtaaacaaaatacaactcctgtc
ccaatgaggttgcgtattaggtcaaagactctttttggtcatcttgataactgtgacatg
attgatgcaaaggcttcattggaggattctgggtgcactgcttgtgatacagtttctgaa
tgtcaggacactgtgaaggtcttaagttcagaagcccccactgaagtagatagcagaaca
ccaactttagatgatgaagaccgtgagaagaagttagatgcagataatattggtggatct
tctgggacagaattgcaagtttcacagccggtgcggtcacatgatatgatgttcactgct
gtctatagaaggtcaaaatttggtcggagtagaagtggtagagaaggtgtcagtggaagt
atggaagcgaccacttcaaatgtggggagccatagcctagctgagggttctgaggccgtt
atcgagggagttcgaagaactaggtctattagattaagaccaacaacttgcgatgtgaat
cctgctcataacaatgacagatttgtgcagtcacatgacggttcggatgggacctcagtg
gaaaagacaacaggtaacaacaatgatgaaagctcgtttgaagagaagctacttggttca
gctagttctgttgggttgcgttctacccgaacaaggagagccagctattctgcccgtgaa
cctagtcctccagacagaaagaaatcataccaagcagcaaaaagctcatggttgatgttg
gtagcccatgaggagggctcccggtatatacctcagcgaggggatgaaattgtatattta
agacagggccatgaagagtacataagtcagaatagtttgagggatttaggcccctggaaa
acaataaagggaaaaataagagcagtagaattttgtttgattgaaaacctcgagttcaaa
acacggccaggttctggagaaagctgtgctaaaatgacagtgaaatttgtagatcctgct
tctgatgtggtggggaaatcatttcagttgacactgcctgaagtgactggcttccctgat
ttccttgttgaaagaaccagatatgatgctgctatagaaaggaactggacttctcgggac
aaatgccaagtttggtggaagaatgaaggtgaggaagatgggagttggtgggaaggtagg
attctaaatgtgcaagctaaatctcatgaatttcctgacagcccctgggaaaggtatgtt
gtccgatataagagtgatccatcggaaactcatcagcatagtccttgggaactatatgat
gctgacacacaatgggagcaacctcgtatagatgatgaaaccagagagaagctgatgagt
gcgtttactaagctggagcaatccgggaataaagctcaggactattatggggttgaaaaa
ttgagacaggtttcacacaagtcaaacttcattaacaggtttcctgttcccttgtcactt
gaaactattcgggctaggctagagaacaattactataggagtctggagggaatgaaacat
gacattgaggtgatgctctcaaatgcagagtcatattgtggaagaaatgtcgagttaaca
acgagagtgagacgtttgtctgagtggttcagacggacaatctcatctttgtag
DBGET
integrated database retrieval system
