Solanum pennellii: 107007794
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Entry
107007794 CDS
T04130
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spen03032
]
107007794
03400 DNA repair and recombination proteins [BR:
spen03400
]
107007794
Enzymes [BR:
spen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
107007794
DNA replication proteins [BR:
spen03032
]
Prokaryotic type
DNA Topoisomerases
107007794
DNA repair and recombination proteins [BR:
spen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
107007794
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-GeneID:
107007794
NCBI-ProteinID:
XP_015062059
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Position
1:98209270..98229800
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AA seq
953 aa
AA seq
DB search
MKLHTLNPQASFVQSNSMAFSTGIRLLRCYHHHFTFTAIPSRFSGLRKASSELRFLSSVT
PSRKHVRPVSARRKVTEEEVGEEGNGSVVLRDRDGNEGGGGERIVHTELHKEATEAYMSY
AMSVLLGRALPDVRDGLKPVHRRILYAMHELGLSSKKPYKKSARVVGEVLGKFHPHGDNA
VYDSLVRMAQDFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTV
DFVPNFDNSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEA
TLQELLEYMPGPDFPTGGIIMGNIGILEAYRTGRGRVVIRGKTDIELLDAKTKRAAIVIQ
EIPYQTNKASLVEKIADLVENKTLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYR
LTALQSSFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQERNHIVEG
IIIGLDNLDEVINTIRKASSHALATANLRKEFELTEKQAEAILDISLRRLTALERNKFVD
EGKSLRTQISKLEELLSSEKQILQLIEEEALEIKDKYFTPRRSQLEDTDSGDLEDIDVIP
NEEMLLAISEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSD
KGTVYSSPAYKIPECSRTAAGTPLIQILSLSDGERITSIIPVSEFAGDQYLVMLTVNGYI
KKVSLNYFASIRSTGIIAIQLVPGDELKWVKCCSNNDFVAMASLNGMVILTPCANIRALS
RNTRGSVAMRLKDGDKVASMDIIPDALQKELDMTLAVHQRNKRSMNGPWLLFVSESGYGK
RVPVSRFRTSPLNRVGLIGYKFSSEDRLAAVFVVGFSFGEDGESDEQVVLVSQSGTVNRI
KVRDISIQSRYARGVILMRLEHAGKIQSASLISAADADSDSDPEVEDGSAVEA
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcacacgcttaaccctcaagcttcattcgtacaatccaattccatggccttt
tcaactggcattcgtctattacgctgctaccaccaccacttcactttcactgcaatacca
tctcgcttctcggggctccgaaaagcctcgtcggagctccggtttctttcatcagttact
ccgtcgaggaagcatgtccgaccggtaagtgcccggcggaaagtcactgaagaggaggtt
ggagaggaaggtaatggaagtgttgttcttagagatagagacggaaatgagggcggagga
ggggagagaattgtacataccgagcttcacaaggaggctactgaggcatacatgtcttat
gcaatgtcagtgctgctgggtcgcgctttgcctgatgttagggacgggttgaagccagtg
cacaggcgaatactatatgcaatgcatgagttggggctttcttctaagaaaccgtataaa
aaatctgcgagagttgttggagaggttcttggaaaatttcatcctcacggagacaatgca
gtctatgattccttggtccgaatggcccaggatttttccttgcggtctccactcattcga
gggcatggaaactttggttcaattgatgcagatcctcctgcagccatgcgttacactgaa
tgccgtctggaagcactcactgaggccatgctattagcagacctggagcagaacacagta
gactttgtcccaaattttgacaactctcagaaagaaccatcactacttcctgctcgtatt
ccgaacttgttgttaaatggtgcttctgggattgcggttggtatggctaccaatattccc
ccccataatcttggggagcttgtggatgcgctatctgcactgattcataatccagaagcc
acgctgcaagaactgttggagtacatgcctggtcctgacttcccaactggcggaataatt
atgggcaacattggaattttggaggcatataggactggaagaggacgagtagtaattcga
gggaagactgatattgaattactcgacgccaagacaaaacgcgctgcaatagttatccaa
gagattccttatcaaacaaacaaagcgtcccttgttgagaaaattgctgatcttgtggaa
aataagactttggaaggagtaagtgatatccgtgatgagagtgatcgatcaggaatgcgt
gtagtcattgagcttaaaagaggatctgatccagccatcgtgttgaataatctttaccgt
cttactgctctgcaatccagttttagttgcaacatggtcggtattctcaatggtcaacca
aagctgatggggttaaaggaattgctccaggcatttttggattttagatgctctgttgtt
gaaaggcgggctaagtataaactttcacaagcacaagaaagaaaccatattgttgagggt
attataattggacttgataacttggatgaggtcatcaatacaatcagaaaagcatcaagc
catgcgctcgcaactgccaatttgagaaaagaatttgaattgactgaaaaacaagctgaa
gctatattagatataagcctgagaaggcttacagcactcgagagaaataaatttgtcgac
gaggggaaatccttgagaacgcaaatttccaagttagaggaacttttgtctagtgagaag
caaatactccagttgattgaagaagaagcacttgaaataaaggacaagtatttcactcca
aggcgttcacagttagaggatacagacagcggtgatcttgaagatatagacgtgattccg
aatgaagaaatgctactggcaattagtgagaagggctatgttaaacggatgaaacctgac
acatttaatctacaaaatcgagggactatcggcaaatcagttggtaaattaagagtaaat
gatgcaatgtctgatttccttgtttgcagggcccatgacaaagttctctattttagcgat
aaaggtaccgtgtactcttctccagcttacaagattcctgaatgcagccgaactgcagcc
ggcactcctttaattcagatattgtccttgtctgatggcgagagaataacttcaattatt
cctgtgagcgaatttgcgggagatcagtatcttgtgatgcttactgtgaatggatatatc
aaaaaagtatcattgaactattttgcctctattaggtctacaggaataattgcgattcaa
ttggtcccaggtgatgaattaaaatgggtgaaatgttgctcaaataatgattttgttgca
atggcttcactaaatggaatggtgattttgacgccttgtgcaaatataagagcacttagt
agaaatactagaggctctgttgccatgagactaaaagatggggataaagtggctagcatg
gacattataccagatgctttgcagaaggaactggacatgaccttggcagttcatcaaaga
aataaaaggagcatgaatggcccgtggctgctgttcgtgtcagaaagcggttatgggaag
cgagttccagttagcagattccgcacatcacctttgaatagagtcggtttaattggttac
aagttttcatctgaagatcgcctggcagcagtatttgtagttggattctcctttggagaa
gatggtgagagtgatgagcaagttgttcttgtgagccagagtggaacggtgaatcgcata
aaagttcgggacatctccatccagtcccggtatgcgagaggagtaattctgatgcgtctt
gagcatgctgggaaaattcagtcagcctcattgatctcagcagcagatgccgattcagat
tcagatcctgaagttgaagatggatcagcagtagaagcataa
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