Solanum pennellii: 107007824
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Entry
107007824 CDS
T04130
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
spen
Solanum pennellii
Pathway
spen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107007824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107007824
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107007824
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
HECT type E3
107007824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
107007824
NCBI-ProteinID:
XP_015062105
LinkDB
All DBs
Position
1:complement(70560554..70600059)
Genome browser
AA seq
1030 aa
AA seq
DB search
MFFSGDPSTRKRVDLGGRSSKERDRQKLLEQTRLERNRRLWLRQQNSAALKIQKCFRGRK
EVETERSKVRENFLRTHGERCHAVDRQCFSPDSDFLRHLLFFFNPTYTADVSVLVETCRS
LLEFVRDNGDVISLFAGTEYASKAALVRYRVKKFAHACIRAVYGNRNKLRDQLFMESEKS
CTSAILLLDAVTLLIDLGLPWACSTVTYLLQRNIYSLFREIVLIGKDRSFPASNRVVSSF
ERVLGLITSHIGQGTCTCPTVDPQCFFPSQILTIPFLWRFFPHLKEILASPSVSRHYFHQ
MKLCMKDHINVLPPDIAIDLPGHACLLGNLLEVAGLAFAQPESFTMAVDFATVATFLLEA
LPSLQSSKMGSIEISEDEMVIDDEQTEKALNLGLEQQITNAINPRFLLQLSTVLLGGFSP
LNGLHSGQLEENHIAAVTAVCAFLHTTFNILPLERIMTVLAYRTELVPVLWNFMKHCHEN
QKWSSLSEQSPYFPADAPGWLLPLSVFCPVYKHMLMIVDNEEFYEQEKPLSLKDIRCLIV
ILRQALWQLLWLNPTVPANFGKSTTAIVAMKKHPLEFLQHRVCVVASELLSQLQDWNNRR
QFTPPSEFHADGVNEYFISQAMMENTRANDILKQAPFLVPFTSRAKIFTSQLAEARQRNG
SQGLFARHRFRIRRDHILEDAFNQLNALSEEDLRGLIRVTFVNELGVEEAGIDGGGIFKD
FMENITRAAFDVQYGLFKETADHLLYPNPGSGLIHDQHLQYFHFLGTVLAKAMFEGILVD
IPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYEGDVSDLELYFVILNNEYGEQA
EEELLPGGKSTRVTNENVITFIHLVANHRLNFQIRQQSSHFLRGFQQLIQKEWIDMFNEH
ELQLLISGSLDGIDIGDLRAHTNYTGGYHKEHYVIDTFWEVVKNFSLENQRKFLKFVTGC
SRGPLLGFKYLEPLFCIQRAGGHASDEALDRLPTSATCMNLLKFPPYRSKEQMEQKLLYA
INADAGFDLS
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctccggtgatccttcgacgagaaagcgagtcgatttgggtggccgcagctcc
aaggaacgtgaccgacagaagcttctagagcagactcgtttagagcggaatcgtcgcctc
tggttgcgtcagcagaactctgctgccctcaaaattcagaaatgcttcagaggtagaaag
gaggtagaaactgaacgttctaaagttcgcgagaatttcttgagaactcatggggaacgc
tgccacgctgttgacaggcagtgcttcagtccagattcagactttttgcgtcacctactt
ttctttttcaatccgacatacactgctgatgtttctgtccttgtggagacatgccgatcg
cttctagagtttgttcgagataacggggatgttattagcctctttgctggtacagaatat
gcttccaaagctgccttggtgagatacagagtgaagaaatttgctcatgcttgcattcgg
gctgtttatggaaacaggaataagttaagagatcaactttttatggaatctgagaagtcc
tgtacatcagcaatcctcttgttggatgcagtaacattgttgattgatttagggcttcct
tgggcttgcagcactgttacctatcttcttcaaagaaatatatattccttatttcgggaa
attgttctgattggcaaggatagaagctttccagcttccaacagggttgtatcttcattt
gagcgtgtgctgggactaattacatctcatattggtcaaggcacttgtacttgcccaacc
gttgatccacaatgtttctttccctcccagattcttacaattccatttttatggcggttt
ttccctcacctgaaagagatcttggcaagtccatcagtgagtcgtcattattttcatcag
atgaaattatgcatgaaagaccatattaatgtcctccctcctgatatagcgattgatctt
cctggtcatgcttgccttcttgggaatctattggaagttgccgggcttgcttttgctcag
ccagaatcattcactatggccgttgattttgctactgttgcaacttttttgttggaagca
ctcccttctctccaatcatcaaagatgggaagtatagaaatttctgaggatgaaatggtc
attgatgatgaacaaacagaaaaagctctgaatttgggtttggagcaacagataaccaat
gctataaatccacgttttcttctacagctgagtactgtgttactaggtggattttcacct
ctcaatggtttacatagtggccagcttgaagaaaatcatatagcagctgttactgcagtt
tgtgctttccttcatacgactttcaacattttgccgcttgaacgtattatgactgtacta
gcctatcggacagaactagttcctgtcctttggaacttcatgaaacattgccatgaaaat
cagaaatggtcatccttgtcagaacaatcaccatattttccagcagatgctcctggatgg
ctgctacctttatctgttttctgccctgtttataagcacatgcttatgattgttgataat
gaggagttctatgaacaggagaagccgttgtctctgaaggatatcagatgcttaattgtt
atccttagacaggccttgtggcagctcctctggttgaaccctacagtgcctgctaacttt
ggtaaatcaacaactgctattgttgctatgaagaagcatccgttagagttccttcagcac
agggtctgtgttgtagcatctgaactcctatcacagttacaagattggaacaacagacgg
caatttacacctcctagtgaatttcatgctgatggtgtaaatgaatatttcatatctcag
gcaatgatggagaatactagagccaacgatatactaaagcaagctccattcctggtgcca
tttactagccgagccaaaatatttacttcacaactcgctgaagcaagacaaaggaatggg
agccagggtctctttgctaggcatagattcagaattagaagagaccatattctggaagat
gcttttaaccaattgaatgcattgtcggaggaggatctacgtggactgatacgtgtgact
tttgtcaacgaacttggagttgaggaagctggtatagatggtggtgggatattcaaggat
tttatggagaatatcactcgagcagcttttgatgtacaatatggattatttaaggaaact
gcggatcatctactctatccgaatcctgggtctgggctgattcatgatcaacacctccag
tattttcattttctggggacagttcttgcaaaggcaatgtttgaaggcatccttgttgat
attccatttgcaacattctttttgagcaagttgaagcaaaagtataactatttgaatgat
cttccttccttggatccagaattgtatcgccatctcatcttcctgaagcattacgaaggt
gatgtttcagatcttgagttgtactttgtcattctcaacaatgaatatggagagcaagcg
gaagaagagctgcttcctggtggtaaaagcacacgtgttactaatgagaatgtcatcacc
tttattcatcttgttgctaaccatcgtttaaactttcagatccgtcaacaaagttctcat
tttctgaggggtttccaacagctaatacaaaaggagtggattgacatgtttaatgaacat
gaacttcagcttcttatttctggatcacttgatggcattgatattggtgaccttcgagct
cataccaattatacaggaggttaccataaggaacactatgttattgatacgttttgggag
gttgtgaaaaacttttctttggaaaatcagagaaaatttctgaagtttgtgactgggtgc
tcacgaggacccttactcggatttaaatatttagagccgttgttctgcatacagagagcg
ggtgggcatgcttctgatgaagctcttgatcgtctgccgacatcagctacttgcatgaat
cttttaaaatttccaccatacagaagcaaagagcagatggagcagaaattgttatacgcc
ataaatgctgatgctggttttgatttaagctga
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