Solanum pennellii: 107007831
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Entry
107007831 CDS
T04130
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Pathway
spen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107007831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107007831
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107007831
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
107007831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-RING_UBOX
zf-Di19
Motif
Other DBs
NCBI-GeneID:
107007831
NCBI-ProteinID:
XP_015062116
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Position
1:complement(979607..987447)
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AA seq
308 aa
AA seq
DB search
MAPGGSNYQDIGDSRSAYSDYGIAPESAEFKNSPFRKAAAVIGGKNGVGSNSAVHELLEC
PVCMNPMYPPIHQCPNGHTLCVKCKSKVHVCPICRHELGNIRCLALEKIAESLELPCRYQ
IYGCQDIFTYHTRLRHEQNCRFRPYNCPYAGSECAVTGDIQYLVAHLKDDHKVDMHDGCT
FNHRYVKSNPQEVENATWMLTVFNCFGHQFCLHFEAFNLGLAPVYMAFLRFMGDDDDAKR
FSYSLEVGGFGRKLTWQGVPRSIRDSHKTVRDSLDGLIIQRSMALFFSGGDRKELKLKVA
GRIWREPL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggctcccggaggcagtaattaccaggatattggtgattcccgcagtgcatattctgac
tatggtattgcaccagaaagtgctgagttcaaaaactccccctttagaaaagctgcagct
gttattggtgggaagaatggagtgggatctaatagtgctgttcatgagctacttgaatgc
cctgtttgtatgaatccaatgtatccaccaattcaccagtgtccaaatggccacacatta
tgcgtgaagtgcaagtcaaaagtacatgtgtgtccaatttgccgccatgagcttggaaac
ataagatgtctagcactggaaaaaattgctgagtcactagaattgccgtgccgataccaa
atttatggctgtcaagatatattcacttatcatactaggcttcgtcatgagcagaactgc
agatttcgaccatacaactgcccatatgcaggatctgaatgcgctgttaccggtgatatt
cagtacctcgttgcacacttaaaagatgatcacaaagttgatatgcatgatggctgtacc
ttcaatcatcgttatgtcaaatctaatcctcaagaagttgagaatgctacatggatgttg
acggtctttaactgtttcggtcaccagttctgcctgcactttgaggctttcaatcttgga
ttggcaccggtatacatggcattccttcgttttatgggtgatgatgatgatgcgaaaaga
tttagttatagtcttgaagtaggtggatttggcagaaagttaacatggcagggagtaccg
aggagcatccgtgatagtcataaaactgtccgagacagtttagacgggctgattattcaa
aggagcatggcactcttcttctctggtggtgacaggaaggagctgaagctaaaggtagct
gggcgtatttggcgagagccattgtaa
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