Solanum pennellii: 107007927
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Entry
107007927 CDS
T04130
Name
(RefSeq) exosome complex component RRP41 homolog
KO
K11600
exosome complex component RRP41
Organism
spen
Solanum pennellii
Pathway
spen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107007927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107007927
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107007927
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
107007927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107007927
NCBI-ProteinID:
XP_015062268
UniProt:
A0ABM1FVH9
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Position
1:complement(96980929..96987255)
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AA seq
243 aa
AA seq
DB search
MEYVNPEGLRLDGRRPMEMRQLRAEIGVVSRADGSASFEMGNTKVIAAVYGPREVQNRSQ
QMNDQALVRCEYSMANFSTGDRRRKTKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIY
VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYLEDSAGGAD
VTVGILPKLDKVTLLQMDAKLPMDIFENVMQLAVEGCKAVESHIREILLENAQTLVIRQG
YGS
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgttaatcccgaaggtctccgtttagatggtcgccgtccaatggagatgaga
caacttcgtgctgaaataggggttgtatcgagagcagatggttctgcctcgtttgaaatg
gggaataccaaagtcattgcagcagtttatggtcctagggaggttcagaacaggagccaa
cagatgaatgaccaggcactggtacgttgcgagtatagcatggctaatttcagcactggc
gatcgccggagaaaaacaaagggtgacaggagatccacggagatatctcttgttattcgc
cagacaatggaagcttgcatattgacacacctgatgcctcgctctcagatagacatttat
gtccaagtcctccaagcagatggaggtacaagatcagcatgcataaatgctgccacactg
gcactagctgacgccgggattcccatgcgtgatcttgttacatcatgcagtgctggatat
ctgaatagcacacctcttctggatttaaactatttggaagacagtgctggaggcgctgat
gtcactgtaggaattttacctaagttggacaaagtgacccttctgcagatggatgctaaa
ctaccaatggatatttttgaaaatgtcatgcaattagcagttgaaggctgcaaagcagta
gaaagccacatccgagaaatattgttagaaaatgctcagacattggtcattcgccaaggg
tatggctcttaa
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