Solanum pennellii: 107007958
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Entry
107007958 CDS
T04130
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107007958
03036 Chromosome and associated proteins [BR:
spen03036
]
107007958
Spliceosome [BR:
spen03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107007958
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
107007958
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
RRM_RdRP1_2
xRRM
HAT_Syf1_M
NRDE-2
Motif
Other DBs
NCBI-GeneID:
107007958
NCBI-ProteinID:
XP_015062305
UniProt:
A0ABM1FVL2
LinkDB
All DBs
Position
1:102128130..102141619
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AA seq
856 aa
AA seq
DB search
MAETETLDSSPHPPQLSDDNPTGNEDQDMLDADKSAKDSDSDSQSDSDSDSEDDAQQNTQ
IHALETEILNNPSNYDTHVQYIKALRKQGDIEKLRQAREAMSAIFPLSSEMWQEWTKDEI
SLSSGLDALPTIEKLFDCGVSDYLSVALWCDYLSFVQEHDQSVRTLSAAGISKARNLFER
ALVAAGLHVAEGSRIWELYREFEQAIFLTIDETDADSREKQVQRIRNLFHRQLSVPLADL
CSTLLTYKAWEAEHGANLDVDSSNLDGLSPQVASSYQKALDMMNGRTHLENQISHKVAPE
SERLKNFRDYLKFEQSLGDPARIQILYERAITEFPISSELWLDYTHYMDKTLKTSSLVRD
TYKRASRNCPWVGELWVRYLLSLERSRASEDEISAVFEKSLQCTFSSFEEYLDIFLTRVD
GLRRRLSLLTSGAESSNLDYIIIRETFQRASDYLSPHLKNTESLLRMYRYWARLESTLGK
DLVAARGVWERLLKISGSVLEVWQGYIAMESAMGNINEARSLFKRCYSKRFPGTGSEDIC
NSWICFEREYGALDDFDLAVKKVTPRLEELQLFKLQEAKSIGVSADDGDNSSRKNVREKR
KPISNLIEEQSPAKRHKDKAKNVKITSEDGKGIAKEPVKVNDKKPDVAASKPVSGSKKEN
KDVTSGKPQQYDDQCTAFVSNLNLKATHDDLRKFFSDVGGVVAVRILTDKFTGKSRGLAY
VDFSDDKHLAAAVAKNKHTLLGKRVSIAKSDPKGRKRGSAAPGTSLRQGDNADQTTESSK
SGAKNSAEGSEGGLQPSSHHRASNIQLKGKNTFAMPRTVRPLGWVDKDQPKSKESDSVED
ENPKSNDEFRKMFIRS
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaccgaaaccctagattcctctcctcatccacctcaactttccgacgacaat
cctaccggtaacgaagaccaagatatgctcgacgcagacaaatccgctaaagattccgat
tccgattctcagtcagactccgactccgattcagaagatgatgcacagcagaatacacaa
attcatgctcttgaaactgagatcttaaataatccttccaattacgacactcatgttcaa
tacataaaagctttaaggaagcaaggagatatcgagaaacttagacaagcaagggaagcc
atgagtgctatttttcctttgagttcagagatgtggcaggagtggacaaaagacgagatc
tctcttagttcaggacttgatgctctccctacaattgagaagctatttgattgtggggtg
tccgactatctgtctgttgcattgtggtgtgactacttgagttttgttcaagagcacgac
caatcagtccgtacactttctgcagctggaatttcaaaggcaagaaatctgtttgagcgt
gcccttgttgctgctggtttgcatgttgctgaaggcagcaggatatgggaattatacaga
gagtttgaacaagctatcttcctcactattgatgaaactgatgcagactcgagagagaag
caggtccagcgaattaggaatttattccatcgccagttgtctgttcctcttgctgatctt
tgttcaactctcctcacatacaaggcttgggaagcagaacatggagccaatcttgatgta
gactccagtaacttggatgggctctcgccacaagttgcctcttcttatcaaaaggccctt
gacatgatgaatgggaggactcatctcgagaatcaaatatctcataaagttgcacctgaa
tcagaaaggcttaaaaactttagggactacttaaaatttgagcaatcattgggggatcca
gcgaggatacagatcttatatgagcgtgccataactgaatttcctatatctagtgaactc
tggcttgattatactcactacatggataaaactttgaagacctccagtcttgttcgagac
acttacaaaagggcatcaaggaactgtccctgggttggagaactgtgggtgcgatatttg
ttgtctcttgaacgcagtcgtgcttctgaggatgagatatctgctgttttcgagaagtct
ctacagtgcactttttcaagctttgaagagtatcttgatatatttctcacaagagttgat
ggcttaaggcggaggttgtctttattgacatctggagcggaaagcagcaacttagattat
ataattatacgggaaacttttcagcgtgcatcagattatttgtctccacacctgaagaac
acagaaagtttattgcggatgtacagatattgggcccgcttagaatcaactctggggaaa
gatctagttgcagcccgtggtgtatgggagcgcctgcttaaaatcagtggatctgtgcta
gaggtgtggcaagggtacatagctatggaaagtgcgatgggtaacattaatgaagctaga
tctctctttaagagatgctacagtaaacggtttcctgggactggctcagaggacatatgc
aattcgtggatttgcttcgagagagagtatggtgccctggacgattttgaccttgcagtt
aaaaaggtcactcctcgccttgaagaactgcagttattcaaactacaagaagctaagagc
atcggtgtgtcagcagatgatggagacaattcttctaggaaaaatgtgcgtgaaaagagg
aagccgatatctaatttaattgaagaacaatctcctgctaaacgtcacaaagataaagct
aaaaatgttaaaatcacttctgaagatggtaaaggcatcgcaaaagaaccggtcaaggta
aatgataaaaaaccagatgtggctgctagcaagccagtgagtggaagcaaaaaagagaac
aaagatgtcacttcagggaaaccacaacagtatgatgaccagtgtactgcatttgtatct
aacctgaacctcaaggcaacccatgatgacctacgtaaattcttcagtgatgttggagga
gtggttgctgtacgaatattaacagacaagttcactggcaagtcaaggggattggcttat
gtggacttctcagatgacaaacacctggctgcagccgtggcaaaaaacaaacacacattg
cttgggaagagagtgagcattgctaagtcagatcccaagggcagaaagagaggaagtgct
gctcccggtacatctttgagacaaggtgataatgctgatcaaactactgagagctcaaaa
tcaggtgccaaaaattctgctgaaggttccgagggggggcttcaaccttctagtcatcac
cgggcatctaatatccagctcaaaggtaagaatacgtttgcaatgcccagaactgtcagg
ccactgggttgggtcgacaaagatcaacccaaatcaaaagaatctgattctgtggaagat
gaaaatcctaaatccaatgatgaattccggaaaatgttcatcagatcttga
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