Solanum pennellii: 107007972
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Entry
107007972 CDS
T04130
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
spen
Solanum pennellii
Pathway
spen03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107007972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spen03009
]
107007972
Ribosome biogenesis [BR:
spen03009
]
Eukaryotic type
90S particles
GTPase
107007972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
AAA
AAA_22
MMR_HSR1
AAA_16
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
107007972
NCBI-ProteinID:
XP_015062322
UniProt:
A0ABM1FVM8
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Position
1:98756142..98771969
Genome browser
AA seq
1220 aa
AA seq
DB search
MAIDGEQSHKSHRSRQSGPTAKKKSKSDKKKKGASDENNKQHNPKAFAFNSTVKAKKLQA
RATEKEQKRLHVPTVDRSTGEPAPYVIVVQGPPKVGKSLLIKSLVKHYTKQNLPEVRGPI
TIVSGKQRRLQFIECPNDINGMIDVAKFADLALLLIDGSYGFEMETFEFLNILQNHGFPK
VMGVLTHLDQFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHEKYSKREVHNLARF
ISVMKFPPLSWRMSHPYIVVDRFEDVTPPEKVRMDNKCDRNVILYGYLRGCNMKKGTKVH
IAGVGDYSLAGITALPDPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYININD
HFVQFSKVDETAAVGGRRGKGNDVGEALVKSLQNTKYSIDEKLENSFISLFGKKHNPSPA
NHAKADQTNDLVPAERDQSGFEPNSDGSDEDNDAEDLNELEPLQLERIHLKESNDTSDDS
SEEENNIGPEKHPGLSSSFREHVDFHDGRMRRKAIFDNDNDFDEKDYSEEDVEEDAQDDD
LEDTDEENEAYHNSGDDDDFDTNEEDMGNASRWKEFLSERTRNRQNVNLMQLVYGASESK
STTKAELRQHGAENDESDTEFFVPKGEGTKKLEEQMNDDNIDAEDCSKFVNFSSQIDWRI
QESIETIRFRFVSKGWSKTARGGGSRDVNGNDDVGEDDEDLFGDFEDLETGQKYESHEAG
GTGTNDMIRMDDESAVEERRLKKLALRAKFDSQYGGSDSSNEDEDEVIKPDTKSHRGQAD
GNGYYDKLKEEVELQKQVNLAALNELDEATRIEIEGFRTGTYLRLEVHDVPSEMVEYFDP
CHPILLGGLALGEENVGYMQVRLKRHRWHKKVLKTRDPIIVSIGWRRYQTVPIYAIEDQN
GRHRMLKYTPEHMHCLAMFWGPLVPPHTGMIAVQNLSNNQASFRITATATVLEFNHAARI
VKKIKLVGHPCKIFKKTALIKDMFTSDLEIARFEGAAIRTVSGIRGQVKKAAKEEIGNQP
KKKGGSAKEGIARCTFEDKILMSDIVFLRAWTQVEVPSFYNPLTTALQPRDQTWRGMKTV
AELRREHNLPVPVNKDSLYKPIERKRKKFNPLVIPKQLQKGLPFASKPKDAPARKRPLLE
DRRAVVMEPHERKVLANIQKLRLIQHEKIKTRKLKDDEKKKALETERTKEEQLSKKRRRE
ERREKYRVQDKMNKKSRRDT
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggctatcgacggagaacagtcgcacaaatctcaccggtcacgtcaatccggtcctacc
gccaagaaaaaatccaagtccgacaagaaaaagaagggtgcttccgacgaaaacaataaa
caacataatcctaaggcatttgcatttaattccactgtgaaagcaaagaaattgcaagca
cgagcaacagagaaggagcagaagaggcttcatgtcccaacagttgataggtccactggt
gaaccagctccatatgtaattgtggtgcagggacctcccaaggttgggaagtcgctgtta
attaagtctctcgtgaagcactatacaaagcaaaatttacctgaagttcgaggtcccatc
actatagtatcaggtaagcagagacgtttgcagtttatagagtgtccaaatgatatcaat
ggaatgattgatgtggcaaagtttgcggatttggcattgcttctcattgacggtagctat
ggctttgaaatggagacctttgaattccttaatatactgcaaaatcatggatttcctaaa
gttatgggtgttcttacacatctcgaccagttcaaggatgttaagaagcttagaaagacg
aagcaacggttaaagcatagattttggactgagatatatgatggagctaagttattttat
ttgtctggtctcatccatgaaaagtactctaaacgtgaagtgcataatcttgctcggttt
atctctgtcatgaagtttcctcctttatcctggcgcatgtcccacccctacattgttgta
gatcgatttgaagatgtaactccccctgaaaaagtgcgcatggacaacaagtgtgacaga
aatgtcattttgtacggttatcttcgtggatgtaatatgaagaaaggaacaaaggtacat
attgctggtgttggtgattatagtttagcaggtataacagcattacctgatccatgccct
ctaccatctgctgccaagaagaagggactaagggacaaagaaaagctgttttatgccccc
atgtctggattgggtgatcttctttacgataaggatgctgtgtatataaacataaatgat
cactttgtccagttctctaaggttgatgaaacagctgctgttgggggtcgcagagggaag
ggcaatgatgtcggagaggctttagttaaatcacttcagaacacgaaatattcgatcgat
gagaagttagaaaatagttttatttctctttttgggaaaaaacataatccatccccagca
aatcatgctaaagctgatcaaactaatgatttggtgcctgcggagcgagatcagtctggg
tttgaacccaacagcgatggatcagatgaggacaatgatgctgaagatttgaatgagttg
gagccactacagttggagcgtattcatcttaaggagtcaaatgacacctcggatgatagt
tctgaggaagaaaataatattggaccagagaagcacccaggattgagtagtagtttcagg
gaacatgttgattttcatgacggaagaatgagaagaaaagctatctttgataatgataat
gattttgatgaaaaggattatagtgaagaagatgtcgaagaggatgcacaagatgatgat
ttagaggacactgatgaggaaaatgaagcttatcataattcaggggatgacgatgatttt
gatacaaatgaagaggacatgggcaatgcttcaagatggaaagaatttctgtctgaaagg
acacgtaatcgccaaaatgttaatcttatgcagcttgtatatggggcatccgaatccaag
tcaactacaaaagctgagttacgacagcatggcgctgaaaatgatgaaagtgatactgag
ttcttcgtgcccaaaggggaaggaacaaagaaactcgaagagcagatgaatgatgataat
attgatgctgaggactgctccaaatttgtaaatttttcaagtcaaattgactggaggatt
caagaatcaattgaaactatccgtttccggtttgtcagcaaaggctggtccaaaacagca
cgtggaggtggctcaagggatgtcaatggtaatgatgatgttggtgaggatgacgaggat
ctgtttggtgattttgaagacttggaaacaggtcagaagtatgagagccatgaggcaggt
ggtactggaactaatgatatgatccgcatggatgatgaatcagcagttgaggagcgcagg
ctaaagaaattggcacttcgtgcaaaatttgattctcaatatggtgggtcggattcctcc
aatgaggatgaggacgaggttattaaaccagacacgaagtctcatcggggtcaagctgat
ggaaatgggtactatgataagttgaaggaagaggtagagcttcagaaacaagtgaattta
gcagcactaaatgaacttgatgaggccactcggatagagatagaaggcttcagaacagga
acttatcttagactagaagttcacgatgtcccctctgaaatggttgaatattttgatcct
tgccatccgattcttctcggaggtctagcacttggagaagaaaatgttggatacatgcag
gttcggttgaagcggcacaggtggcacaagaaagtgctgaagactagggatccaattatt
gtttctattggttggaggcgctaccaaactgtacctatttatgccattgaggatcaaaat
ggccgtcaccgtatgctcaagtacactcctgaacacatgcattgtttggcaatgttttgg
ggtccccttgtgcctccacacacgggaatgatcgctgtccagaacttgtcaaataatcaa
gcatcctttagaatcactgcgactgcaactgtgctagagttcaaccatgcagcaagaata
gtcaaaaagattaagttagttggtcacccatgtaaaatattcaagaagacagcacttatc
aaggacatgttcacttcagatcttgaaatagctaggtttgaaggtgctgctattcgaact
gttagtggaattcgtgggcaagtgaaaaaggctgctaaagaagagattggtaaccaaccc
aagaagaagggtgggagtgccaaagaaggcattgctagatgcacatttgaggataagatc
cttatgagtgacattgttttcttgcgtgcttggactcaagttgaagttccttccttctac
aatccattgacaacagcattacagccgcgtgatcaaacttggcgaggaatgaaaacagtt
gctgaattaaggagagaacataatctaccagtgcctgtcaacaaggattcattatataag
ccaattgaacgaaagcggaaaaagttcaaccccttggtaattcccaagcaattacagaaa
ggtctcccctttgcctctaagcccaaggatgctccagctcggaagcgaccactcctggaa
gatcggagggctgtggtgatggaaccccatgagcgcaaagtgcttgctaatattcaaaaa
cttagactcattcagcatgagaagataaaaacacgcaagctcaaagatgatgagaagaag
aaagcacttgaaacagaaaggaccaaggaagagcaactctcaaagaagcgacggagagaa
gagagacgagaaaagtaccgtgtgcaggataaaatgaataagaaaagccgcagggatact
tag
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integrated database retrieval system
