Solanum pennellii: 107008088
Help
Entry
107008088 CDS
T04130
Name
(RefSeq) cell division control protein 48 homolog C isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
spen
Solanum pennellii
Pathway
spen03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107008088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spen03009
]
107008088
Ribosome biogenesis [BR:
spen03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107008088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_22
TIP49
AAA_14
AAA_2
RNA_helicase
AAA_28
nSTAND3
AAA_33
IstB_IS21
Bac_DnaA
AAA_17
AAA_18
NPHP3_N
Rad17
Nucleolin_bd
Mg_chelatase
Viral_helicase1
Parvo_NS1
AAA_3
ATPase_2
NACHT
ABC_tran
Cytidylate_kin2
NB-ARC
TsaE
AAA_19
AAA_7
BRX
Vps4_C
AAA_11
CPT
Motif
Other DBs
NCBI-GeneID:
107008088
NCBI-ProteinID:
XP_015062481
UniProt:
A0ABM1FW26
LinkDB
All DBs
Position
1:complement(87527162..87533264)
Genome browser
AA seq
823 aa
AA seq
DB search
MGRGGRGGGSGSGGRRSLSSSFDRELRTHIESCKNNYLSVEDLVDHLRSSYHKYSREKLQ
PFTKRVQDVLQLQSSNPNSTEEVTPPKKKPKRDGSEQRLQLLEKKHIMSSQRKKQEGDGS
SSTTLASTSDSDDSYSSSSSDAIYGEKLEEKPDLMKSMLRHTYNQQVNSTPKSKKIEYEV
IHDNNDEKRKKLVMSKGGQRRNIATKDLGGGRGGGEGERFGDSEGNVDGPKFKDLGGMDA
VLEELKMEVIVPLYHPQLTKHLGVRPMSGILLHGPPGCGKTKLAHAIANETRVPFYKLSA
TELVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIAAKRENLQREMERRIVTQLMTC
MDESHRLVKPDDAKGTALPTDKRNNEAKSDGSNGGPGYVLVIGATNRPDAIDPALRRPGR
FDREIALGIPDENARVQILSVLTRNLRVEGAFDLTKIASSTPGFVGADLAALTNKAGNLA
MKRIIDERKVELSREMTDGEDAEEWWRKPWSPEEMEKLSIFMADFEEAAKLIQPSSRREG
FSAIPNVKWEDVGGLDSLRHDFDRYIVRRIKNPKDYMGFGVDLETGFLLYGPPGCGKTLI
AKAVANEAGANFIHIKGPEILNKYVGESELTIRTLFTRARTCAPCILFFDEMDALTTKRG
KEGGWVVERLLNQLLIELDGADQRKGVYVIGATNRPEVMDQAILRPGRLGRLLYVPLPSP
DERVLILKALARKKPVDSSVDLLTIGRDDACKNFSGADLAALMNEAAMVALEDKLTAMAT
SCDDTSSVIKESHFKCALEKVSPSVSNEQIKYYQELSKHFRAA
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggggaggacgcggcggcggcagcggcagcggtggacgccggtcactttcgtcg
tcgttcgatcgagagcttcgcacccatattgagtcctgtaagaacaattacctctccgtt
gaagatctcgtcgaccacctccgttcatcttatcacaagtattcccgcgaaaagttacag
ccgtttaccaaacgggtccaagatgttctgcagctccagagctcaaaccctaactcaact
gaagaagtaacgcctccgaagaagaagccaaaaagagacggcagcgagcagcgattgcag
ctccttgagaagaagcatataatgagtagtcaaagaaagaagcaggaaggggatggttct
tcgtcgacgactctcgcaagtacttcggatagtgatgattcttattcttcttcgtcttcc
gatgctatttatggagagaaattggaagagaagcctgatttaatgaagtctatgcttcga
catacgtacaatcaacaggttaatagtactccaaagtcgaaaaagattgaatacgaggtg
attcatgacaataatgatgaaaaaaggaagaaacttgttatgtctaaaggaggacaacga
agaaacatagccactaaggatttaggaggaggaagaggaggaggagagggggaaaggttt
ggggatagtgaagggaatgttgatggcccaaagttcaaggatttaggaggaatggatgca
gtgttggaggaactgaaaatggaggtgattgttccattgtaccatcctcagctgactaag
catcttggagttaggcctatgtcagggatactcttacacgggccaccaggctgtggtaaa
acaaaactagctcatgctattgccaatgagactcgagttccattctacaaactatctgct
actgagttggtctctggagtttcaggtgcatcagaagagaacataagggaactgttctca
aaagcataccggacagcaccttctattgtgtttattgatgagattgatgcaattgctgcc
aaaagagaaaatttacagagagaaatggagcggcgcattgtaacacagctaatgacgtgc
atggatgagtcacatagacttgtaaaacctgatgatgcaaagggaactgctctacccact
gataaaagaaataatgaagcaaaatcagatggatctaatggtggacctggttatgtccta
gtaattggggcgacaaatagacctgatgctattgacccagcattgaggaggcctggacga
tttgaccgtgaaatcgccttgggtattccagatgaaaatgcaagggtgcaaattttgtct
gtgcttacacgtaacctaagagttgaaggtgcatttgatctcacgaagatagctagctca
accccaggatttgtcggagcagacttggctgctctaactaacaaagcaggtaacttggca
atgaagaggataatagacgagaggaaggttgagctttcaagagaaatgacagatggtgaa
gatgccgaagaatggtggagaaagccatggtcacctgaagagatggaaaagctcagcatt
tttatggctgattttgaggaagcagctaaattaattcaaccttcatctagaagagaaggt
ttctccgctatccctaatgttaagtgggaagatgttggaggccttgattcgttaagacat
gactttgaccgttacattgttaggcgtataaagaatcctaaagattacatgggttttgga
gtggacttggaaacaggattcttgctttatggtcccccgggatgcggtaaaacattaatt
gccaaggctgttgctaatgaagctggagcaaattttatacacattaagggacctgaaatt
ttgaacaagtatgttggtgaaagtgagctaaccattcggacattatttacccgtgcaagg
acatgtgctccatgcattctattctttgatgagatggatgcattgacaactaagcgtggt
aaggaaggaggttgggtcgttgaaagacttctgaatcagctactaatagaactagacggt
gccgatcagagaaaaggtgtttatgtgattggtgccacaaatagacctgaagtcatggac
caagctattcttcgacctggaaggttagggagactcttatatgtccctctacctagtcca
gatgagcgtgtactcattttaaaagctcttgcccggaagaagcctgtagattctagtgtt
gacttgttgaccattggaagagatgatgcgtgtaaaaattttagtggagctgacctagca
gcactgatgaatgaagctgcaatggttgcactagaagataaattgacagccatggctaca
agttgtgatgacacatcatcggttattaaggagtcacatttcaaatgcgctttggaaaaa
gtatctccatccgtctccaatgagcaaataaaatactatcaggagttatcaaaacacttc
agagcagcatga
DBGET
integrated database retrieval system
