Solanum pennellii: 107008263 Help Entry 107008263         CDS       T04130                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism spen  Solanum pennellii Pathway spen03430   Mismatch repair Brite KEGG Orthology (KO) [BR:spen00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     107008263  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:spen03400]     107008263 DNA repair and recombination proteins [BR:spen03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      107008263 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor LBR_tudor Tudor_KDM3B Motif Other DBs NCBI-GeneID:  107008263 NCBI-ProteinID:  XP_015062708 LinkDB All DBs Position 1:88723579..88734105 Genome browser AA seq 1315 aa AA seqDB search MAASSRRSSNGRSPLVNQQSQITSFFSKALSSSSSSSPSPLLPKQIPQKSNPNPNTKPNP KSKPNRSPSTSPCVSPTTPSPLSAKRKITVPISAVVDLKPSYGQEVVDKRVKVYWPLDKI WYEGCVKSFDSSSGEHLVKYDDGDEEMIDLAEEKIEWVKAPVGKLRRLRRSSVVEEKEEE EEKLEDLKSVEDDSEDEDWGKDAAKLVSEGEDASEDMDLEIEEEDDGVVGPKSRKVSGSK VVARKRKTVEGEKLTPSSSKKSKTLADKRSANSKMDSAVIGVNGKEPTATNEDGAKASNN VNVLLCGAADRFGLRETQKFPFLGKDRKDANRRSPDDADYDPRTIYLPPNFLKGLTGGQR QWWEFKSKHMDKVLFFKMGKFYELYEMDAHIGAQELHLQYMKGEQPHCGFPERNFSMNVE KLARKGYRVLVVEQTETPEQLENRRREMGSKDKVVRREICAVVTKGTLTEGEMLAANPDA SYLMAVTENSLTAAFRQEKRTYGVCMVDISTGKILIGQFEDDSDCSALCCLLSELRPVEI IKPAKLLSHETERVLMRHTRNPLVNELVPLSEFWDAERTICEVKGVYRNMSLSLLSSSPN EMGTHESTASEEDGERNFLPDVLCELINLGGNGSYALSALGGVLYYLKQAFLDESLLKFA KFELLPLSGFCDGTQKWNMVLDAAALENLEIFENSRNGDSSGTLYAQINHCITAFGKRML RSWLARPLYRPESIRERQDAVAGLKGPNLPSVLEFRKELSRLPDMERLLARLFGSSEANG RNANKVTLYEDAAKKQLQEFISALRGCESMLHACSSLGVILGNTDSKLLHHLLTLGNGLP DVDSVLKHFKDAFDWVEASNSGRIIPHEGVDEEYDAACKQVQEVELKLAKHLKEQRKLLG DSSIDYVTIGKDAYLLEVPESLCRSIPKEYELQSSKKGYFRYWNPILKKLIGELSHADSE KESKLKSILRRLIGRFCEHHNKWRELVSTTAELDVLISLSIASDYYEGPTCRPNIKSVPS QDDVPVLLAENLGHPVLRSDCLDKGTFVSNNISLGGPPNASFILLTGPNMGGKSTLLRQV CMAVILAQVGADVPASSFDISPVDRIFVRMGAKDHIMAGQSTFLTELLETASMLSMASRN SLVALDELGRGTSTSDGQAIAESVLEHFVHKVQCRGMFSTHYHRLSIDYQKDSRVSLCHM ACQIGKGSGGLEEVTFLYRLTPGACPKSYGVNVARLAGLPDDVLHRAAAKSEALEIYGHN KQSEENPSENLTGKTVTLLQNLINLVEHNKYDDNNGVIDELSGLQNRARILLEQN NT seq 3948 nt NT seq  +upstreamnt  +downstreamnt atggccgcttcttctcgccgctccagcaatggcagatcaccgctagtcaatcaacagagc caaatcacttctttcttctccaaagccctctcgtcttcttcttcttcttctccttcacct cttctccccaaacaaattccacaaaaatctaaccctaaccctaatactaaacctaatcct aaatctaaacctaatcgtagtcctagtaccagtccttgtgttagtcctactactccttct cctctaagtgcaaagcggaagattactgtgcctatttcagccgttgttgaccttaaacca tcatatggacaagaggtagtggataaaagagttaaggtttactggccattggataaaata tggtatgaaggttgtgtgaagtcttttgacagtagttctggtgagcatttggttaagtat gatgatggtgatgaggaaatgattgatttagctgaagaaaaaattgaatgggtgaaggca cctgtggggaagttgaggcggttgcggaggtcttccgtggtggaagagaaggaggaggag gaggagaaattggaggatttaaagagtgttgaggatgattctgaggatgaagattgggga aaggatgctgctaaactagtgtcggaaggtgaggatgcttccgaggatatggatttggag attgaggaagaagacgatggtgttgttggacctaaaagtcggaaagtgagtgggagcaag gtggtggcgaggaagaggaaaactgttgaaggggaaaagttaactccgagttcgagcaag aagagtaagactcttgcagataagaggagtgctaatagcaaaatggactctgctgtgatt ggagtaaatggaaaagagcctactgcaaccaatgaggatggtgccaaggcatccaacaat gtcaatgtattgctgtgtggtgcagcagatagatttggactacgtgaaacacagaaattc ccattccttgggaaagatagaaaggatgcaaataggaggtccccagacgacgctgattat gatccaaggactatttacctacctcctaattttttaaaaggtttaactggtggtcagaga caatggtgggagttcaagtcgaagcacatggataaagttttgttttttaagatgggaaaa ttctatgagctttatgagatggatgcacatattggagcccaggaacttcatctgcagtat atgaagggagagcaaccacattgtggatttccagaaaggaacttctcaatgaatgtagag aagttggctcggaagggttatagggttcttgtggttgagcaaacagaaacacctgaacag cttgagaatcgtcgaagagagatgggatctaaagataaggttgtcaggcgtgaaatatgt gcagtagtcaccaaaggaacattaactgagggagaaatgcttgcggcaaaccctgatgcc tcatatttgatggctgtgactgaaaactctctaactgctgcattccgacaagagaagcgc acttatggtgtctgtatggttgatattagcacaggcaagattcttattggacagtttgag gatgattcagattgtagtgccttgtgttgtctactttctgagttaagaccagtggaaata ataaagcctgctaaattgcttagtcatgaaactgagagagtgctgatgcggcacacacga aatccgctagtgaatgagttggttcctctttctgaattttgggatgctgagagaacaatt tgtgaggtgaagggagtatataggaacatgagcttgtcactgctgtcatcatctccaaat gaaatgggaacacatgaaagcactgcctctgaggaagatggcgaaaggaactttctacca gatgttttatgtgaacttataaatcttggtgggaacgggagttatgcactctcagcactt ggaggagtgttatactacttgaagcaagcttttctggacgaatccctgctcaaatttgcg aaatttgagctacttcccctttctggtttttgtgatggtactcaaaaatggaatatggtt cttgatgcagctgcactggagaatcttgagatatttgaaaacagtcgaaatggagattct tcagggacattatacgctcaaatcaaccactgtatcacagcatttgggaaaaggatgctc agatcatggcttgcaagacccttgtatcgtccagaatccattagagaacgtcaggatgct gtagccggattaaaggggcccaatctaccttctgttcttgagtttagaaaggagttatca aggcttcctgatatggagcggttgcttgcacgcctctttggtagcagtgaagccaatgga agaaatgcaaataaagtgactttatacgaggatgcagcaaagaaacaactgcaagagttc atatcagctttacgtggatgtgaatcaatgttgcatgcatgctcttcacttggggtgatc ttgggaaacacagactcaaagctactacatcatctattaacactcggcaatggtcttcca gatgtagattcagttctcaagcatttcaaggatgcttttgattgggtggaagcaagtaac tcaggtcgtattatacctcatgaaggggttgatgaggagtatgatgctgcatgtaaacaa gttcaggaggttgaacttaaattagccaagcacttgaaggaacagaggaaactacttgga gactcatcaatagattacgtgacaataggaaaagatgcataccttttggaagtaccagaa agtttgtgcaggagcattcctaaggagtacgaattacagtcatcgaaaaagggttatttc aggtactggaatcccatcttaaagaaattaattggagagctttcacatgctgattcagag aaggaatctaagctaaaaagcattttgcggaggctgataggacggttttgtgaacatcat aataagtggagagaattagttagtactactgcagaattggatgttttaatcagtttgtca attgcaagtgattactatgaggggccaacatgtcgtccaaacatcaagtcagtgccaagt caagatgacgtgccagttcttcttgctgaaaatttaggacatcctgttcttagaagcgat tgtctagataagggtacctttgtttccaacaatatttcccttggaggtcctccaaatgcc agctttatccttctcactggtcctaacatgggagggaaatcaactcttttgcgccaagtc tgcatggctgtaattttggcccaggtaggagctgatgtaccagcatcatcgtttgacata tcacctgttgatcgtatatttgtaagaatgggcgccaaagatcatattatggcaggccag agtacattcttgacagaactcttggaaactgcttcaatgctgtctatggcaagccgtaat tcacttgtcgcgcttgatgaacttggccgcggtacatctacttctgatggacaagcaata gctgaatcagtgcttgaacactttgtccacaaggtgcaatgtcgaggaatgttttctacc cactatcatcggttatctattgactatcaaaaagactccagggtctcgctgtgccatatg gcatgccaaattggaaaaggttccggaggtcttgaggaagttacttttctttacaggttg acaccaggtgcatgccctaaaagttatggtgtcaatgttgcacggcttgctggacttcct gatgatgtgcttcacagagctgccgcaaaatctgaggcgcttgagatttatggtcacaat aagcaatctgaagaaaacccttctgagaatttgacaggaaagacagtaacactgctccaa aatttgataaatttggtcgaacacaataaatatgacgacaacaacggtgtgattgatgag ctgagtggactgcagaacagagcaagaatactccttgaacaaaattaa

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