KEGG   Solanum pennellii: 107008401
Entry
107008401         CDS       T04130                                 
Name
(RefSeq) LEC14B homolog
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
spen  Solanum pennellii
Brite
KEGG Orthology (KO) [BR:spen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:spen04121]
    107008401
Ubiquitin system [BR:spen04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107008401
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_RIG_2nd WDR54 PROPPIN Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 107008401
NCBI-ProteinID: XP_015062909
LinkDB
Position
1:complement(88141803..88148820)
AA seq 470 aa
MSRSRRFLNERARGDGMKLIDERGGTSVLDHEISQLTKIRSNPHERMRHLLPGKGKEPVS
SVKMLAAREGNYTGRGRFSSSDCCHLLSRYLPTNGPSVVDQMRSCAYVSQFSTDGSLFVA
GFQESHIRIYNVDQGWKIQKDIRAKSLRWTITDTSLSPDQRFLVYSSISPIVHIVDVGSG
MKQSVANVTEIHEGLEFSSPTYDHDNYTFGIFSVKFSTDGRELVAGCSDSSIYVYDLEAK
RLSLQIPAHMSDVNAVCFADETGHLIYSGSDDSLCKVWDRRCFGTREQAAGVLIGHLEGI
TYVDTRGDGRYLISNGKDQAIKLWDIRKMSSNINYSPRPRSYDWDYRWMGYPEHVRNKRN
PHDLSLSTYKGHSVLRTLIRCYFSPAHSTGQKFIFAGSSDSSVYIYDVVSGARVAKLDYH
QEPVRDCNWHPYYPTLVSSGWDGIIAKWEFSGADTSPLPKKPLSRRWRRS
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgagcaggtctagaaggttcttgaatgaaagggctaggggagatgggatgaaacttatt
gatgaaaggggtggaacaagtgttcttgatcatgagatttcccaacttacaaagattagg
tcaaatccccatgaaagaatgaggcacctgcttcctggcaagggaaaagaaccagtttca
tctgttaaaatgttggctgctagagaagggaattatacaggcagaggaagattttcgtca
tctgattgttgtcatcttctgagccggtatcttccaacaaatggtccctctgtagttgac
caaatgaggagctgtgcttatgtttcacagttttcgacggatggttctctttttgttgcc
ggatttcaggaaagtcatattaggatatataatgttgatcaaggctggaaaattcagaag
gatattagagcaaaaagtttgagatggacaatcaccgatacatcgctttctcctgaccaa
cgttttcttgtttattccagtatttcacccattgtccatattgttgatgttggatctggc
atgaaacagtctgtagcaaatgttacggaaattcatgaaggcttggaattttcttcccct
acctatgatcatgacaattatacatttggaatattctctgtgaagttttctactgatggg
cgagaacttgttgctggctgcagcgacagttcaatatatgtttatgatcttgaagcaaaa
aggctaagtctccaaattccggctcatatgtctgatgttaatgctgtatgctttgctgac
gaaactggacacctcatatattctggaagcgatgatagcctgtgtaaggtttgggacagg
cgttgctttggtactagagagcaagcagctggggttctcattggacatctagaaggcatt
acatatgttgacactcgaggagatggccggtatcttatctcaaatgggaaagatcaggct
atcaaactctgggatataaggaaaatgtcttctaacattaattactccccaaggcctaga
agttatgactgggattacagatggatgggctacccagagcatgttagaaacaagagaaat
ccacatgacctgtcattgtctacttataaaggccactcagtcttgcgcactcttatacgc
tgctatttctctcctgcacatagcacagggcaaaagttcatcttcgctggatcaagcgat
tcttctgtctatatctatgatgtggtgagtggagctcgggttgcaaaacttgattaccat
caggagccggtgagagactgtaactggcacccttactaccctacgctcgttagctctgga
tgggatggtatcattgctaaatgggagttttctggtgctgatacaagcccattgccaaag
aagcctctatccagacgatggaggcgatcttaa

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