Solanum pennellii: 107008412
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Entry
107008412 CDS
T04130
Name
(RefSeq) protein CHROMATIN REMODELING 24 isoform X1
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spen03036
]
107008412
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
107008412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
HDA2-3
Motif
Other DBs
NCBI-GeneID:
107008412
NCBI-ProteinID:
XP_015062928
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All DBs
Position
1:complement(87378685..87392747)
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AA seq
1215 aa
AA seq
DB search
MSKPQQQPRSLNQRHNQILSSLSASHSKPLPDDMTKFEARRGLNKNDDFPTFSFTIDSDS
SPSPVRFSSNGIGNDAVPSFSGIADFSPDSEPSGEVEEINDQLTFENDVPDFSPDSAKSS
PLGGNEIDESKHEIQEELSDQPKDYSDYQSPGTGLKEIDETENGIQEELSNPPENSFDSL
DSLSFSGKKEIDQPTSGTKEDPLLSKIVDNSSSLSVDMERSEHVRENCELSQEGQEDYEK
TSNEGEEKITKVKIKGRRRLCKISEDNNDSEEMKLKDDEESGLLGITDFDSPPRQVKSAV
QNEHGGSGNEIRDILNDLSSRLEILSIEKKRAPKPHDLTKKNEIPEYQSAGSSFSLSSGS
SSDSTKESRIGGEIPKEYRKKIDSGTASKNNCVVHKFNDTRSSVGAPKRKEVKQMTGKSQ
PMKNAISAYKFLEEGDANDSDDDCVVVGDESAVTQVGRHNRKTRHERKHSDDFDSHDFVS
EEDHTYTLSGPKFNYGLPGKIAKMLYPHQREGLKWLWSLHCLGKGGILGDDMGLGKTMQI
CGYLAGLFYSKLIKRVLIVAPKTLLPHWIKELTAVGLSQKIREYFATSAKLRNYELQYVL
QDKGILLTTYDIVRTNVKSLCGDQYYEDRDEELTWDYMILDEGHLIKNPSTQRAKSLHEI
PCAHRIIISGTPLQNHLKELWALFNFCCPGLLGDKQWFKEKYEHLILRGNDKNAYDRDKR
IGSAVAKELREHIQPYFLRRLKSEVFSDDSSTSAKLSKKNEIIVWLKLTNCQRQLYTAFL
KSEIVLSSFDRSPLAALTILKKICDHPLLLTKRAAEEVLEEMDSTSNHDDRAVAERLVMQ
MANVSEKLEEEVVSHDVSCKITFILALLDNLIPGGHNVLIFSQTRKMLNHLQDALISNGF
QFMRIDGTTKATDRLKIVNEFQEGRGAPIFLLTSQVGGLGLTLTRADRVIVVDPAWNPSM
DNQSVDRAYRIGQTKDVVVYRLMTTGTVEEKIYRKQVYKGGLFKTATEHKEQIRYFSQQD
LRELFSLPKDGGFDISNTQKQLNEEHDHEHKMEETLKAHVKFLETLGIAGVSSHSLLFSK
TAPVSAVQDEDEVKIARERMTYIGNSSSYSSVERPVDASQYAFKPKDVNLQRKSVPTARV
GRTESQIQDDLRRCYRMLADKEKISKLFDNGQKLQGRIAYLREELETIRMKKDNKNEIID
LGDDISEQFDRVVNV
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaccccagcagcaacctagaagccttaatcaacgccataatcagattctcagt
agcctttctgcttcacattctaaacctctgcctgatgatatgacaaaattcgaagctagg
cgaggtttaaataaaaatgacgactttcccactttctcttttactattgattccgattct
tctccttctccagttcgattttcttcaaatggtataggaaacgacgccgttcctagtttt
tctgggattgctgatttcagtcctgattctgagccttctggagaggtggaagagattaat
gatcaattgacttttgagaacgacgttcctgatttcagtccagattcggctaaatcttct
cctttaggggggaatgagattgatgaatccaagcatgaaattcaagaggaattaagtgat
caacccaaggattattccgattatcagagtcctggaactgggttaaaggagattgatgaa
accgagaatggaattcaagaggaattaagtaacccacctgagaattcttttgattctctt
gatagtttgtctttttctgggaaaaaggagattgatcaacccacgagtggaaccaaagag
gacccactattatctaaaattgttgataacagttcttccctatctgtagatatggaaagg
tccgaacatgtgcgtgaaaactgtgaactctctcaggaaggccaggaagattacgagaaa
acatcaaacgaaggagaggagaaaataacgaaggtgaagatcaaaggtcgtcgccgcctt
tgcaaaatttcagaggataacaatgacagtgaggaaatgaagcttaaggatgatgaagag
tccggacttctcggcataacagattttgattcacctcctcgtcaggtgaaaagtgcagtt
cagaatgaacatggtggttctgggaacgaaataagggatatcctgaatgatttaagttca
agacttgagattttgtccattgagaaaaagagggcaccgaagccccatgatttgactaag
aagaatgaaattccggaataccaaagtgctggttcctcattttcactttcttctggttcc
tcatctgattcaaccaaggaatctaggataggaggagaaattcccaaggagtatcggaag
aagatcgattcagggactgcatctaagaacaattgtgtcgtccataagttcaatgataca
agatcttctgttggagcaccaaagaggaaagaagttaagcagatgactggaaaatcacag
cccatgaagaacgctatttctgcctacaaattcctggaagaaggagacgctaatgacagt
gatgatgattgtgtggttgttggtgacgagagtgctgtcactcaagtgggaagacataac
aggaagactagacatgagcgtaaacattcagatgactttgattcacatgattttgtttca
gaggaggatcacacttacacactcagtggaccaaagttcaattatgggttacctggtaaa
attgccaaaatgctgtatcctcaccaacgtgagggtttgaagtggctttggtctcttcac
tgtctgggtaagggtggaattttaggcgatgacatgggtttggggaagaccatgcagata
tgcggctacttagctggattgttttattcaaagttgataaagagagtgttgattgttgct
cccaaaactttgttaccccattggatcaaggaattaactgctgtaggcctttctcagaaa
attagggaatattttgcgactagtgccaaactccgaaattatgagcttcaatacgttctt
caggacaaaggcattctcctgacaacatacgacattgtaagaaccaatgtgaagtcttta
tgtggtgatcagtattatgaagacagagatgaggagttgacatgggattatatgattctt
gatgaggggcatctcataaagaatcccagtacacagagggctaaaagtttgcatgagatt
ccttgtgctcatcgtatcataataagtggcacgcctcttcaaaaccacctcaaggagtta
tgggcgctgttcaacttctgctgccctgggctgctgggcgacaaacaatggttcaaagag
aaatatgagcatctcattcttcgtggaaatgataaaaatgcttatgacagagacaagcgt
attggctcagcagtcgcgaaggaattgagggaacacattcaaccatattttctgcgacgt
ctcaagagtgaggtattttctgatgattcctcgaccagcgcaaaactttccaagaaaaat
gagattattgtgtggcttaaattgacaaattgtcagcggcaactctacacagctttcttg
aagagtgagattgtcctgtcatcctttgataggtctccgctggctgcacttactatctta
aagaaaatatgtgaccatccactactactaacaaagagggcagcagaagaagttcttgaa
gagatggattcaacctcaaaccatgatgaccgtgctgtggcagagagattggttatgcaa
atggcaaatgtgtctgagaaacttgaagaggaagtagtatcacatgatgtttcctgcaag
ataacatttatactggctttgttggacaatttgattcccggcggacacaatgtgcttatc
ttttctcaaacacgcaagatgcttaatcacctccaagacgctttaatatccaatgggttc
cagttcatgaggatagatggaaccaccaaagctactgacagattgaagattgttaatgaa
ttccaagagggtcgtggtgctccaatatttcttttaacttctcaagttggtggtctaggt
cttacactcacaagagcagatcgagtgattgttgttgatccagcatggaatccaagcatg
gataatcaaagtgttgaccgcgcctacagaattgggcagaccaaggatgttgttgtttat
agattgatgactactggcacagttgaagagaagatctataggaaacaggtatacaaaggg
ggattgttcaaaacagcaactgagcacaaagaacaaatccgttatttcagtcaacaggat
cttagggaactcttcagccttcccaaagatggtggttttgacatatcaaatactcagaaa
cagttgaatgaagagcatgatcatgagcacaaaatggaagagactctaaaggcccatgta
aagtttttggagactctgggtatagctggagttagcagccatagtttgcttttctcaaag
acagcgcctgtatcagctgtccaagatgaggatgaagtgaaaattgcacgagagaggatg
acatacattgggaactcatcatcatactcatcagttgaacgtcctgttgatgcgagtcag
tatgcttttaagccaaaggacgtgaatttacagagaaagtctgtacctactgctagagtt
ggtcgtacagaatctcaaatccaggatgacctcaggcggtgttatagaatgcttgcggat
aaggaaaagatatccaagttatttgataatgggcagaagttacaaggtcgaattgcttat
ctgcgtgaggagctggagactattcgaatgaaaaaggataacaagaatgaaatcattgac
ttaggtgatgacatatctgaacaatttgacagggttgttaatgtgtaa
DBGET
integrated database retrieval system
