Solanum pennellii: 107008440
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Entry
107008440 CDS
T04130
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI2 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107008440
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
107008440
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
107008440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ariadne
IBR
UBA_ARI1
IBR_2
IBR_1
zf-RING_2
zf-RING_UBOX
FlxA
Motif
Other DBs
NCBI-GeneID:
107008440
NCBI-ProteinID:
XP_015062965
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All DBs
Position
1:complement(107069491..107077024)
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AA seq
590 aa
AA seq
DB search
MEDYGTSDEDTYSSDQESYDGLENEETDSQWGSSTGNSCKVITRESLLVAQREDLRRVMD
LLSLREHHARTLLIHYRWDVERLFAILVEKGKTCLFAEAGVTILEEIDVDSSVSSSTMMC
GICMEEVAGSEVTKMDCGHCFCNDCWTEHFIVKIKEGQSKRIRCMAHKCFAICDEAVIRK
LVSKRHPDLAEKFDRFLLESYIEDNKMVKWCPSIPHCGNAIRVETDEFCEVECSCGLQFC
FSCLSEAHSPCSCWMWELWTKKCRDESETVNWITVHTKPCPKCHKPVEKNGGCNLVSCIC
GQAFCWLCGGATGRDHTWSSIAGHSCGRYKEDQEKKSERAKRDLYRYMHYHNRYKAHTDS
FTQESRLRETIKEKVANLESRDSRLRDFSWVTNGLYRLFRSRRALSFSYPFAFYMFGDDL
FKDEMTNEEKEIKQHLFEDQQQQLEANVEKLSKVFEDPFDSFEETEIMEMRMQVLNLSVV
TDKLCKKMYECIETDLLGALQFSSHNIAPYQSKGIERATELNGGRNAKANNNIACQKAHD
QTNGGSIELVHPSGCGTSDESGCSSRKRTREDSGGSFFDLNLPAELIDRN
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggaggattacgggaccagtgacgaagatacatattcgtctgatcaagaatcttatgac
ggactcgagaatgaagagactgattctcaatggggctcttccacgggaaattcctgcaag
gtaatcacaagggagtctcttttggtggcacagagagaagatttgcggagagtgatggac
ttgctctcactaagagaacaccatgcaagaaccttgctcattcactatcgttgggatgtc
gagaggttgtttgcgattcttgttgaaaagggaaagacttgcttatttgctgaagcaggg
gtaactattcttgaagaaattgatgttgactcgtctgtgtcttcttcgactatgatgtgc
ggcatatgcatggaagaggtagcagggagtgaagtcacgaaaatggactgtgggcactgc
ttctgcaatgactgttggacagagcattttattgtaaaaataaaggagggtcagagtaag
agaataaggtgcatggctcataaatgctttgctatctgtgatgaagctgttatcagaaag
ctagttagtaaaaggcatcctgatttggcagagaaatttgatcggtttctccttgaatca
tacattgaggacaataaaatggtgaaatggtgtccaagtatccctcattgtgggaatgct
atacgggtagagaccgatgagttctgtgaagtagaatgttcatgtggtttacagttctgt
ttcagttgcttatcagaagcacattcaccttgttcttgctggatgtgggaactttggacc
aagaagtgccgagacgaatccgagactgttaactggattacagttcacactaagccttgt
ccaaagtgtcataagccggtcgagaagaatggaggttgcaacttagttagctgcatttgt
gggcaagcattttgttggctatgtggtggagctactggccgagatcatacttggtcaagt
atcgctggtcacagctgtggtcgttataaggaagatcaggagaagaagtctgaacgggct
aagcgtgatctctatcgctacatgcattatcacaatcgttataaagctcatacggattct
tttacacaggagtctcgtctgagggagaccataaaagaaaaggtagcaaatttggaatca
agggattcaagattgagagattttagttgggttacaaatggactttacaggctgttcaga
tcaagacgggctctctcattttcatacccatttgcattttatatgtttggtgatgactta
tttaaggatgaaatgacaaatgaggaaaaggaaataaaacagcatttatttgaggaccag
caacagcaacttgaggcaaatgttgaaaagttatcaaaagtttttgaggatccatttgat
agttttgaagagacagagatcatggaaatgaggatgcaagtcttgaatctctctgtggta
actgataaactatgtaagaaaatgtatgaatgcatcgagactgatttattgggagctcta
cagtttagtagtcacaatatagctccataccagtcaaagggcattgagagagcaacagag
cttaatggaggccggaacgccaaagcaaacaacaacattgcatgtcaaaaagcccatgac
cagacaaatggaggttccatagaattggttcatccatcaggttgtgggacatcagatgag
agtggatgctcctcaaggaagcgtacaagagaggattccggtggtagctttttcgatctt
aacttgcctgctgagctcattgataggaattga
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