Solanum pennellii: 107008514
Help
Entry
107008514 CDS
T04130
Name
(RefSeq) GATA zinc finger domain-containing protein 14 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
spen
Solanum pennellii
Pathway
spen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107008514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107008514
03019 Messenger RNA biogenesis [BR:
spen03019
]
107008514
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107008514
Messenger RNA biogenesis [BR:
spen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107008514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
Cap4_nuclease
Motif
Other DBs
NCBI-GeneID:
107008514
NCBI-ProteinID:
XP_015063070
LinkDB
All DBs
Position
1:98241193..98248940
Genome browser
AA seq
694 aa
AA seq
DB search
MLPGRNSRPQHPSKFQANGTAPSPPLQVMGNPASFMPNHMQIQSQMANPNNNPNTHFSSG
QLLGYQVNQMNNANFQQKGQFLGQNIVNPPQFLNQNVGFGGMPNPMQNMNQFLQMQMAMQ
MASYAQALSGSVPMYPNQVPQGMGIQNSNIAMNNAHFGHANASGNLSKQMANGSQQLQGQ
SPVMNSFGVVQQQQTQNFNSPASANPQVSQGMGPQSSNFGMNAHLGLVNANVAAQQSKSG
LSKQMPNVTQQLQGQLPLMNSFGFAQQAQNQNFNAPTSANTQVCQGMGPQIPNFSMNAHL
GLLNANGAVQQMPNVNQQLLGQLPMMNPFGFVQQPQTQNFNAPASTNTQANHGCVVGISP
SKGNQQNSYNSNFSRNQKHDAKNSKFGKGKFSTHNKNLGKGHHRNGEKKNIHSNSVKPEM
EKKRPLMVTYSAQEIQQWREERRKNYPSKGNIEKQLTGKMVESEDNSNAAKLRRQQLKEI
LAKQAELGFEVAEIPSSYLSDTEKQVDGMEQKRPLSRKERFQKRFNKKEKFNRNDRFSKK
RRFGNSDSPNTCDQKDFPAGKQDVNRESVTQVTKSARESTLLQKLLSSDIQRDKRRLLQV
FRFMTMNSFFKDQPGKPLRFPRVLLKETGKEIEAAEEISDAIDTNIEKSSSSSSDDDNDK
YEEDNIAEFTEAVSELQEDSSSESEEPEEEQISS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgggtagaaattcacggcctcagcatccatctaagtttcaggccaatggaact
gctccttcacctcccctgcaggttatgggtaacccagcaagttttatgccaaaccatatg
caaattcagtctcagatggcaaatccaaacaataacccgaatacccacttttcctctggg
cagcttttggggtaccaagtgaatcagatgaataatgctaattttcaacaaaaaggtcaa
ttcttggggcaaaatattgttaacccacctcagttcttgaatcagaatgttggttttggg
ggtatgcccaatccaatgcaaaatatgaatcagtttctgcaaatgcaaatggctatgcaa
atggcaagttatgctcaggctctttcagggagtgttccaatgtatccaaaccaggtgcct
cagggtatgggaattcaaaattctaacattgctatgaataatgcacattttggtcatgcg
aatgcaagtggaaatttgtctaagcaaatggctaatggaagtcagcaattgcaagggcag
tcgccagtgatgaactcttttggtgttgttcagcagcaacagactcagaacttcaattct
cctgcttctgctaatccacaggtttctcagggtatgggtcctcaaagttccaattttggt
atgaatgcacatttgggtcttgtgaatgccaatgtagccgcccagcagtctaagagcggc
ttgtccaagcaaatgcctaatgtgactcagcaattgcaaggacagttgcctctgatgaat
tcttttggctttgctcagcaggcacaaaatcagaactttaatgctcctacttctgctaat
acacaggtatgtcagggtatggggcctcaaattcccaatttttctatgaatgcgcatttg
ggtcttttgaatgccaatggagctgtccagcaaatgcctaatgtgaatcagcaattgcta
ggccagttacctatgatgaatccgtttggctttgttcagcagccacaaactcagaacttc
aatgctcccgcttctactaatacacaggcaaatcatggatgcgttgttgggattagccca
tcaaaaggcaaccagcaaaattcttataatagtaacttctcgaggaatcaaaagcacgac
gctaagaattccaagtttggtaaagggaagttctcaactcataacaaaaacctgggaaaa
ggtcatcacagaaatggggagaaaaaaaatattcattctaattcagtgaaacctgagatg
gagaaaaagagacctctcatggtgacttactcagcgcaagaaattcaacagtggcgggaa
gaacgccgtaagaactacccttcaaaaggaaacattgagaagcagctaacagggaaaatg
gtagagtccgaggataattcgaatgctgctaagttgcgccgtcagcaacttaaggaaatt
ctagccaagcaggctgagttaggttttgaagttgcagaaataccatcatcctatctgtca
gatactgagaaacaagtggatgggatggagcaaaaaaggccactgagtagaaaagaaagg
ttccaaaaaaggttcaataaaaaagaaaagttcaaccgaaatgatcgtttctccaagaaa
cgaagatttggaaactccgattcaccaaacacttgtgatcaaaaggactttcctgctgga
aaacaggatgtgaaccgtgaatctgtaactcaggttacaaaaagtgcgagagaatcaaca
ctgctgcagaaactattgagttcagatattcaaagagataaacggcgcctattgcaggtc
tttaggttcatgaccatgaattctttctttaaagatcagcctgggaaacccttgaggttt
cctcgagtgttacttaaggaaacggggaaagaaattgaagctgctgaagaaatatctgat
gctatagatacaaacattgaaaaatcatcatcatcatcatcagacgacgacaatgacaag
tacgaagaagacaatattgctgaatttacagaagcagttagtgagttacaagaagatagt
agcagtgaaagtgaagaacctgaggaagaacaaatctctagttaa
DBGET
integrated database retrieval system
