Solanum pennellii: 107008569
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Entry
107008569 CDS
T04130
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spen01009
]
107008569
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107008569
Enzymes [BR:
spen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
107008569
Protein phosphatases and associated proteins [BR:
spen01009
]
HAD phosphatases
Fcp/Scp phosphatases
107008569
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
107008569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
107008569
NCBI-ProteinID:
XP_015063149
LinkDB
All DBs
Position
1:complement(101344799..101353356)
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AA seq
660 aa
AA seq
DB search
MAKGEAVAVKDAVHKLQLCLLDGIKDESQLIAAGSLLSRSDYQDVVTERSIANMCGYPLC
SNSLPSERSRKGHYRISLKEHKVYDLHETYMYCSTNCVVNSGAFAGSLQDERSSTLNPAK
LNQVLNLFKGLHLHSADNVKENGDLGSSKLKIQEKVDLKGGEVSLEEWMGPSNAIEGYIP
QRDRSVNPALLKNINKGSKNKHARLQDEKNMILNEFDFSSTIITQDEYSVSKFPAPVNAD
SSVKFKETQAKTRYKVRDDDVYILGKQVDALQLRSGEETEKSDKNTRFLKVDKFNSGEVS
SGPSQHDVKNKSVLIMSDDGRKYASHGEHDKLKSSLKSSNSKKMSRSVTWADESIDGGIG
KKTESSSKISEYESQDYGGSASTDMEENDDSYRFESAEACAAALSQAAEAVASGSDVPDA
VSKAGIVILPPSQEVDEAILQETDEMLDLETAPLKWPRKPGMPNYDVFESEDSWYDSPPE
GFNMTLSPFATMFNSLFTWISSSSLAFIYGHDESNNEEYLSINGREYPRKIVLSDGRSTE
IKQTLAGCLARALPGLVADLRLPVPISTLEQGMVLLLNTMSFVDPLPAFRMKQWQLIVLL
FLDALSVCRIPTLTPYMTGRRTSFPKVLDGAQISAAEYEIMKDLIIPLGRVPQFSMQSGG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggagaagccgtcgctgttaaagatgctgtccacaaattacaactctgtctt
cttgatggcatcaaagatgaaagccaactcattgctgctggatctctgttgtctcggagt
gattatcaggatgtagtgaccgaacgatcaattgccaacatgtgtggttatcctctttgc
agcaattctctgccttctgaaaggtctcggaaaggacattacagaatatcattgaaggag
cataaagtttatgatcttcatgaaacatacatgtactgttcaacaaattgtgtagtcaat
agcggagcatttgctggtagcttgcaggatgagagaagctctacactgaatccagcaaag
cttaatcaagtcctgaatctatttaaggggttgcatttgcattctgcagataatgtgaag
gaaaatggagatctaggatcttctaagttgaagatccaggaaaaagtggatttaaagggt
ggtgaagtttcattagaagagtggatgggtccatctaatgcaattgaaggctatattcca
cagagagatcgaagtgtgaatccagcactgttgaaaaacattaacaaaggatccaagaat
aagcatgccagactccaagatgagaaaaacatgatacttaatgagtttgatttttcgagc
actataataactcaagatgagtatagcgtttcaaagttcccagctcctgtaaatgctgac
tcgagtgtaaagttcaaagaaacccaagcgaagacgaggtacaaagttagggatgatgat
gtttatatactggggaagcaagttgatgccttgcagttgcgttctggagaagaaacagaa
aaatcggataagaacactagatttttgaaggtggacaaatttaattctggagaagtgtct
tctggtccttcccaacatgatgtcaagaacaaaagtgtcctaattatgtctgatgacgga
aggaaatatgcatcacatggtgaacatgataagctcaaatcttctttaaaatcttcaaat
tccaagaaaatgtctcggtcagttacttgggctgatgaaagtatcgatggtggcattggc
aagaaaacagagagctcatccaaaatatcagaatatgagagtcaagattatgggggatca
gcctctactgatatggaagagaatgatgattcatatcggtttgaatctgcagaagcctgt
gcagcagcactaagccaagcagcagaggctgttgcctcaggttctgatgttcctgatgct
gtgtccaaagccgggattgtaatattgccaccttcacaagaagtggatgaagcaatactt
caggagactgatgagatgcttgatttagaaacagctcctttaaaatggccaagaaaacca
gggatgccaaattatgatgtctttgaatcagaggactcttggtatgatagtccacctgag
gggttcaatatgactctgtcacctttcgcaacaatgtttaattccctcttcacatggata
tcatcatcgtccttggcatttatatatgggcatgatgaaagcaataacgaggagtatttg
tctatcaacggaagagaatatcctcgcaaaattgtgttatctgatggccggtcaactgag
atcaagcagactctagctggctgtcttgctcgagcattgccgggattggttgctgacctt
aggctgccagtaccgatatcaactttagagcaaggaatggttctcctcttaaatacaatg
tcttttgtggatccactccctgcattccgaatgaagcaatggcaacttattgtacttctg
tttcttgatgctctttctgtatgtaggatacccacactgactccatatatgacggggcga
aggacttcgtttccaaaggtgcttgatggtgctcagataagcgcagcggaatatgagatc
atgaaagatctgatcattccactaggtcgagtgcctcagttctcaatgcaaagtggaggc
tag
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