Solanum pennellii: 107008697
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Entry
107008697 CDS
T04130
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1-like isoform X1
KO
K25869
zinc finger protein IDD1/2
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spen03000
]
107008697
Transcription factors [BR:
spen03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107008697
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_6
zf-met
Motif
Other DBs
NCBI-GeneID:
107008697
NCBI-ProteinID:
XP_015063319
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Position
2:52390358..52393533
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AA seq
527 aa
AA seq
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MPADPDNSSAMNDSTGSGEASVSSSGNQVVPLKESAKKKRNLPGMPDPDAEVIALSPTTL
LATNRFVCEICSKGFQRDQNLQLHRRGHNLPWKLRQRSSNEVKKRVYVCPESSCVHHDPS
RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDLKAHSKICGTREYKCDCGTLFSRR
DSFITHRAFCDALAQESAKTLPEKPPSTNEEPKTQAVASSSPPPSPPAPPPAIECQPPPP
PPPAPKSLMTPTVPPSTAVMSFASSVQNRELRENPVTNSAGAATKQVLEEAAAVASLTGN
CSSSCSNGSSSSNVFGSLFASSTASGSLPSQAPVFSDMFRAMAPEHTLEMAPPSSTEPIS
LGLAMSHSSSIFRPAGQERRQYAPAPQPAMSATALLQKAAQMGAAATSSSLLRGIGVMSS
TSSSNGHQEWSGRPIDANGASLAAGLGLGLPCDAGSGLKELMLGTPSVFDPKHPTLDLLG
LGMAASVGPSPGLSALLTSMGSNLDMVTSAGSFGSADFSGKDLGRNS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgacccagataactcatccgccatgaacgattctacaggctcaggtgaagca
agcgtttcgtcttcaggtaatcaagtagttcctctgaaagaatcagccaagaagaaacgg
aatcttcctgggatgccagatcccgatgcagaggttattgctttgtcaccaacaactttg
ctggcgacgaacagatttgtttgtgaaatttgcagtaaagggtttcaaagagaccagaat
ttgcagcttcatagaagaggtcataatttgccgtggaagttgaggcagagatcaagcaat
gaggtgaagaagagagtatatgtttgccctgaatccagttgtgttcaccatgatccttct
cgggcattgggtgatttgaccggaatcaagaaacatttctgccgtaaacatggtgagaag
aagtggaaatgtgacaaatgctccaagaaatatgctgttcagtctgatttaaaggctcat
tcaaaaatttgtggaactagagagtataaatgtgattgtggcactttattttcaaggagg
gatagctttatcacccatagggcattttgtgatgcattagctcaagaaagtgctaaaaca
ctgccagagaagcctcctagtactaatgaggagcctaagacacaagctgttgcttcatca
tcaccaccgccatcgccaccggcccctccacctgccatcgagtgtcaaccaccaccacca
ccaccaccagctccaaagtctttaatgacccctaccgttccaccgtcaactgccgtaatg
tcatttgcttcctctgttcaaaatcgagaattgcgggagaatccagtcacaaattctgct
ggagctgctacgaagcaagttctggaggaagcagcagcggtagcaagcttgactggaaac
tgtagcagctcttgtagtaatggaagtagtagcagcaatgtctttggaagtttgtttgct
tcatcaacagcttcgggaagtttgccatctcaagctcctgttttttctgatatgtttcga
gccatggcgcctgagcacactcttgagatggcaccaccttcatctacagaaccaatatct
ctcggcctagcgatgagtcacagttcgtcaatttttagaccagctggtcaagaacggagg
caatatgctcccgcaccacaaccagctatgtcggcaacagcattactgcagaaggcagct
cagatgggtgcagcagcaaccagctcatcgttgttgaggggcattggggttatgtcctcc
acgtcatcttcaaacggtcatcaagaatggagtgggaggccaattgatgccaatggtgca
tcattagctgcaggtcttggtcttggactaccgtgtgacgctggttctggtctaaaggaa
ttaatgttgggaactccctcggtgtttgatcccaaacatcccactcttgacctccttgga
ttaggaatggcagctagtgtcggtccatcgcctggattatctgcccttttaacatccatg
ggtagtaatcttgacatggtgacttcagctggatcatttggtagtgcagatttcagtggg
aaagacttgggaagaaattcatga
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