Solanum pennellii: 107008750
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Entry
107008750 CDS
T04130
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
spen
Solanum pennellii
Pathway
spen03440
Homologous recombination
spen03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107008750
03460 Fanconi anemia pathway
107008750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107008750
03036 Chromosome and associated proteins [BR:
spen03036
]
107008750
03400 DNA repair and recombination proteins [BR:
spen03400
]
107008750
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
107008750
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
107008750
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
107008750
FA (Fanconi anemia) pathway
Downstream FA components
107008750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2
Tower
Motif
Other DBs
NCBI-GeneID:
107008750
NCBI-ProteinID:
XP_015063384
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All DBs
Position
2:25318183..25336061
Genome browser
AA seq
1129 aa
AA seq
DB search
MSMWQLYSVSVNDFRWKVSDGESLTEEPSLTLPPQQLQSIPDLLCQGTSRLAGNTDSTCT
RFPIFRGKPVSVKHSSISTALSILGDEDKPILDTGIGTGRQDVLTFQEAVFQKGSGEPLN
APQSFSSSSLNKQFSMSNSLFQTASGKPVNISCTGLNKAKALLGLEENGDHETFPGSGKK
NTTSDELFGFRNSFPIVEVEGIASTGSTNVSAASLSPFDVKFNSPVCPAEELVADFLHSA
DKPPPIKFHTAGGRSITVSCEAFKRAKSLLGDLELGCLVDEKDMADPLLSFSKDQKSVDQ
VSTKELNSDTPVSLLSAAKGSGSSSLFTSPLRSTLYHKKSSIKTENLVPASNLIKEFDAV
AKESTSRLDHSIPQNGEPFNNNSAATDLRENDIASKPKLLERPSRGPLVDISNNIGGGIA
DRNQNVGRKRKPGGSFVSPFKKPRSTSIVNPLKRNDSSAANGFSDLAPKLPSQKGKVSIR
YPFHVARLYMKEYLGKPPSILSKLESLPDDVSRMNPATAETYVFNDESCSGCIGVGSFLE
MLSQSGASMQYVSKKWITNHYKWIVWKLASYERCYSGKFSGKLLTICNVLEELKYRYERE
VNHGHRSAVKRILEGDLPPSSMMVLCVSNIYSIRVSPVGPQSSLSSTTENGTCAKVELTD
GWYSIIAVLDLQLSKKMATGKLFVGQKLRIWGAGLCGWTGPVSPLEVSGTTSLLLHINGT
YRAHWASRLGFCKGGGIPLSFMSIKDGGGAVPLTLVVISRIYPVLFRERLSNRGFVVRSE
RMEVKEMQNFNERRSSIVEGVVSESQREKRDAYIGSDYESKEGARILRILERAAEPEVLM
AEMTSEQLNLFSSYQAKLEAFRQSDMQKSLEKALQTAGLAERDVTPFMRVRVVGLTSKRT
SLKCCPKEGLITIWNPTEKQHCGLAEGQAFSVTGLTPISSDSSTLYLQTKGSTSKWLPLS
PRAVEHFESSFCPRQSISLSKLGEVPISREFDIAAVVVFVGQLYAEAHQTKQWVFVADGS
KAMLDSDDELETLMAISFTSPHIGTDSFAPINSNLVESTVCFCNVIKRARDNVNNLWVAE
ATENSTYYLNYDHSDCSHLKDAGASAERWAKISGLRLEKLRGRVLSIIS
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtggcagttgtactccgtgtcggtgaatgatttccgatggaaagtctcggat
ggagagtctcttactgaagaaccgagcttaaccctacctccccagcagctccaatccata
cccgatctcttgtgtcaaggaacttcgagattagcagggaacactgattcaacttgtaca
agatttccaatttttcgagggaaacctgtgtcagtgaaacattcttccatatcaacagct
ctttccatccttggtgatgaagacaagccgattttggacacaggcataggaactggaaga
caagatgttcttacttttcaggaagccgtgttccagaaaggctcaggggaaccccttaat
gctccacaatccttttcctcttctagcttgaacaaacaatttagcatgtcaaactcgttg
ttccagacagcctccggtaaaccagtcaatatatcttgtacaggtcttaataaggccaag
gcgttgttgggcttggaagaaaatggtgaccatgaaacatttccaggttctggaaagaaa
aatacaacttcagatgagctctttggttttaggaattcctttcctattgtggaagtagag
ggcattgctagcacagggtctactaatgtttcagcagcttcgttgtctccgtttgatgtt
aaatttaactccccagtttgtccagcagaggagttagtagcagattttctgcactctgca
gataaacctcctccaataaagtttcatactgctggtggtagatcaataacagtttcctgt
gaggcattcaaacgcgcaaagagtctgcttggagatctagagctgggttgtcttgttgat
gaaaaggatatggctgatccattgctttctttttcaaaagaccaaaaatctgttgatcag
gtctccaccaaagaattgaactctgatactcctgtttccctcttatcggcagcgaaaggt
agtgggtcctcaagtctttttacatcgccattgagatcaactttgtatcataaaaagtct
tcaattaaaacagagaatctcgttccagcaagtaacttgattaaggaatttgatgctgtg
gcaaaagaaagcactagtaggctggaccatagtattccacagaatggagagccattcaat
aataactcagcagctacggaccttagagaaaatgatatcgcttcaaaacctaaattgcta
gaacggccttccaggggccctttggtggatatctcaaataacattggaggaggaattgca
gatagaaaccagaacgttggtcggaagaggaaacccgggggaagttttgtttctccattc
aagaagcctcgaagcaccagcattgtcaaccctctcaaaagaaacgattccagtgctgct
aatgggttctcagatttagcaccaaaattaccctctcaaaaaggaaaggtttcaattcga
tatccattccatgtggcacgattgtatatgaaagagtatcttggaaagcctccatcaatc
ctgagcaagttagagagtttgccagatgacgtgagcaggatgaatccagctactgctgag
acttatgtgttcaatgatgaatcttgctcaggttgcattggagtagggtcttttttggag
atgctgtctcaatcaggagcttccatgcaatatgtttctaaaaagtggattacaaatcac
tataagtggattgtttggaaacttgcatcttatgagaggtgttacagtggcaaattttcc
gggaaacttctgacaatatgcaatgtacttgaagaattaaaatacagatatgaaagagaa
gtaaatcatggtcatcgatctgcagttaagagaattttagaaggagacctcccaccttct
tctatgatggtactctgtgtttccaatatctattcaattcgtgtctcgccagttggacct
caatcttcattgtctagcacgaccgagaatggaacttgtgcaaaagttgaactgaccgat
gggtggtattcaataattgctgttttagatttacaactatccaagaaaatggctactgga
aagctgtttgttggccaaaagcttaggatctggggagctggattgtgtggctggacaggt
cctgtttcacctcttgaggtgtcagggacgactagtttactgctgcatataaatgggaca
tatagagctcattgggcatctcgtttgggtttctgtaaaggtggtggtattccattatca
tttatgtcaatcaaggatggtggaggtgctgttccactaacattggttgtaatttcaagg
atatatcctgttctcttcagggaaaggttaagtaatcgggggttcgttgtaagatctgaa
cggatggaagttaaagagatgcagaattttaatgaaagacgtagtagcattgtggaggga
gtagtctcagaatctcaaagagaaaagcgagatgcatacatcggaagcgactatgaaagc
aaagaaggggcaaggattttaaggatacttgagagagctgcagaaccagaagttctgatg
gcagagatgacttcagagcagttgaacttattttcatcctatcaagcgaagttggaggca
ttcaggcagtctgacatgcaaaaatctcttgaaaaagctttgcaaactgctggacttgct
gaaagagacgtcactccgtttatgcgagttagagttgttggattgactagcaaacgtaca
tcattgaagtgctgtccaaaggaaggcttgattacaatatggaatcctactgagaaacag
cactgtgggcttgcagagggtcaagctttttctgttactggtcttacaccgataagctca
gactctagcaccctttacttgcaaacgaaagggtccacatccaaatggcttcctttgtct
cctcgggcagttgaacattttgagagctctttctgtcctcgccaatcaatttcattgagt
aaattgggtgaagttcctatttccagggagttcgatattgctgcggtggttgtttttgtg
gggcagctgtatgcagaagctcatcaaacaaagcagtgggtatttgtggctgatggatcc
aaagctatgttggattctgatgacgaattagaaaccttgatggccatcagtttcacctca
ccacacataggaactgattcatttgctccaataaattccaaccttgtagaatctacggtt
tgtttttgcaatgtcatcaaaagagcaagagataatgttaataacctgtgggtagctgaa
gcaactgaaaattcaacttattatttaaattatgatcattcagattgttctcatctaaaa
gatgcgggtgcttctgctgaaagatgggcaaagatatctggtttgagacttgaaaagctt
aggggaagagttttatctataattagctga
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