Solanum pennellii: 107008785
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Entry
107008785 CDS
T04130
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spen
Solanum pennellii
Pathway
spen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107008785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spen03019
]
107008785
03110 Chaperones and folding catalysts [BR:
spen03110
]
107008785
03029 Mitochondrial biogenesis [BR:
spen03029
]
107008785
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spen04147
]
107008785
Enzymes [BR:
spen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
107008785
Messenger RNA biogenesis [BR:
spen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
107008785
Chaperones and folding catalysts [BR:
spen03110
]
Heat shock proteins
HSP60 / Chaperonin
107008785
Mitochondrial biogenesis [BR:
spen03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
107008785
Exosome [BR:
spen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107008785
Exosomal proteins of other body fluids (saliva and urine)
107008785
Exosomal proteins of breast cancer cells
107008785
Exosomal proteins of colorectal cancer cells
107008785
Exosomal proteins of bladder cancer cells
107008785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5398
Motif
Other DBs
NCBI-GeneID:
107008785
NCBI-ProteinID:
XP_015063441
LinkDB
All DBs
Position
2:complement(41956770..41961888)
Genome browser
AA seq
583 aa
AA seq
DB search
MSLSMCSPLYSPFKLSFKEDKGKVNSWGLRQSLGKKKLMVVRAGPKRIAFDKECRRALLS
GINKLADAVSVTLGPRGRNVVLSEGGGLKIINDGVTIAQAIELPDTIENAGATLIQEVAT
KTNRLAGDGTTTAIVLAREMIKAGLLAVDFGANPVSMKKGMDQTVRVLVNTLKKKSHPVR
GNDDIKAVASISAGNDEFIGSLIAEAIKKIGPDGVICIESSSSAETSIMVEEGMKIDKGY
MSPHFINNPEKSIVEFENAKVLVTDQKISSVKEIVPLLEKATQLSVPLLIFAEDIAKQVL
ETLVINKMQGMLNVAVVQCPGFRDGKKGVLQDIAMLTGADFLSGDLGLTLESATSDQLGI
ARKITITSNSTTIVAHPSTKAEIQARIMQIKKDLAETDNKSMSEKLSQRIAKLSGGVAIL
KVGAHTETELEDRKLRIEDAKSATFAAMDEGIVPGGGATFIHLSEQVPLIKESLQDPDEQ
IGADIIGTALLAPAKLIAANAGVDGDTVVEKVRGCDWKMGYNAMTGRYEDLLASGIIDPC
CVSRCALQNAVSVAGIVLTTQAIMVEKTKEPKPLVPHVPGISP
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctcaatgtgttcacctttatactctccatttaagctttctttcaaggaagat
aaaggaaaggttaattcttggggattgaggcaaagtttagggaagaagaaattgatggtg
gtgagagctggcccaaagagaatagcttttgataaagaatgcagaagagctttactttct
ggtatcaataagcttgctgatgctgtttctgtcactttaggacctagaggccggaacgta
gttctctctgaaggtggggggctgaaaataattaatgatggtgttaccatagctcaagcc
atagaacttccagatacaattgaaaatgctggagcgacacttatccaggaggttgcaact
aagaccaacaggttagctggtgacggtacaactactgcaattgttttggcccgtgagatg
atcaaagctgggttattagctgttgattttggggctaaccctgtatctatgaagaaaggt
atggatcagacagtaagagtgctggtcaatactttgaagaagaaaagtcatcctgttaga
ggaaatgatgatataaaagccgtagcttcaatatcagctggaaatgacgagttcattggc
agtttgattgctgaggcaattaagaagattggtcctgatggagtgatatgtattgagtct
tcctcatcagctgaaacctcgatcatggttgaagaaggaatgaagattgacaaggggtac
atgtcacctcatttcatcaacaatcccgaaaaatctatagtagagtttgaaaatgccaaa
gttctggtaaccgatcaaaagatatctagtgtcaaagaaattgttcctttgctagagaag
gccactcaactgagtgtgccactgctgatttttgctgaggacattgcaaagcaagtgcta
gaaacacttgtcattaacaagatgcaaggaatgctcaatgttgctgttgtgcaatgtcca
ggatttcgagatggaaagaaaggtgtattacaagacattgccatgttgacaggtgctgat
tttctttctggagacttaggcctgactcttgaaagtgcaacctccgatcagcttggtatt
gctcggaaaataacaataacaagtaactctacaaccatcgtggctcacccctcgacaaaa
gctgaaatacaagccagaataatgcagataaagaaggatcttgctgaaacagataataaa
tctatgtcagagaagctttcacaaagaatagcaaaactctctggtggtgtggctatattg
aaggtaggagcacatactgaaacagaactggaagaccgaaagctgagaattgaggatgca
aaaagtgccacatttgctgccatggatgaaggaatagtgcctggtggtggtgccactttt
attcatctttctgaacaagtacccttgataaaagaatctttgcaggatccagatgagcag
atcggtgctgacataataggaacggcacttcttgcaccagcaaagttaatagctgcaaat
gcaggagtggatggggatacagttgtggaaaaagttagaggttgtgactggaaaatgggg
tataacgccatgactggaagatatgaagaccttcttgcttctggtattattgatccttgc
tgtgtttcacgatgtgcccttcaaaatgctgtctccgttgccggtatagtcctaactact
caagcaataatggtagagaaaaccaaggagcccaaaccccttgttcctcatgttcctggt
ataagtccttaa
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