Solanum pennellii: 107008792
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Entry
107008792 CDS
T04130
Name
(RefSeq) DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
spen03029
]
107008792
Enzymes [BR:
spen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107008792
Mitochondrial biogenesis [BR:
spen03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
107008792
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
DUF3047
Motif
Other DBs
NCBI-GeneID:
107008792
NCBI-ProteinID:
XP_015063457
UniProt:
A0ABM1FYL0
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Position
2:55460961..55471882
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AA seq
1020 aa
AA seq
DB search
MSCTKTPISLTIKFNTDLETNPYHNSPIMWRNIVKQFSTRTPQKILLTSKNHAYSYLGFG
LDSVFKDKRILRSFIPVSCSNSGFLEMGFQNLGEFLPGDEFLRRPLLCAMKSQVSNNDIC
RKNYASVAEAVAVSSTDAEEDVSVVGEVQELLTELKKEEKKQFTFRRRKQRMLTSGIDRR
KYPALMRRQVQIETQAWEQAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPLRNKIAQ
EQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGEHGNVRVVQAALAIGDAI
EQEVRIHKFLEKTEKHKAEKDRNIKDGEHATLEQKKLHKKVTSLMKKQKLRAVNQIVRSQ
DDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRPAFIHSTRTLAKETKSA
SRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGAR
QQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRLADLVDRDDVPL
PEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHRMKDEEGFFYPHNVDF
RGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGESGLRWLKIHLANLFAGGVDKLSLDGRI
AFTESHLDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETVISHVPVHQ
DGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMNRDAQRDPAEFPDA
VRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDTELFGAACYAAK
VTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHFIKTSL
QILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHAC
DVDKLNRILREKFVELYETPILEKLLEGFQVSYPTLSFPPLPERGDFDLRDVIESPYFFN
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcactaaaacccctatttccctaaccatcaaattcaacactgatttagaaaca
aacccatatcataattctcctattatgtggcgaaacatagtcaaacagttctctacaaga
accccacaaaagattcttcttacctcaaagaatcatgcttatagttatcttggtttcggc
ctagattctgttttcaaggataaaagaatattaagatcctttatccctgtttcttgttcg
aatagtggatttcttgagatggggtttcagaatcttggtgaatttcttcctggggatgag
ttcttgaggagacccttgttgtgtgctatgaaaagtcaagtgagtaacaatgatatttgt
agaaagaactatgctagtgtagctgaggctgttgcagtatcttccactgatgcggaggaa
gatgtgtctgtggttggtgaagttcaagaattgttaactgaattaaagaaagaagagaaa
aaacagttcacttttaggcggaggaagcaaaggatgttgactagtggtattgaccgcagg
aagtatccagcgcttatgaggaggcaagtccagatagagacacaggcatgggaacaagct
gcaaaggagtacagggagcttttgtttgatatgtgtgagcaaaaattagcacccaatttg
ccatatgtgaagtcattgtttttggggtggtttgagcctttgcgcaacaagatagctcaa
gagcaggaattatgtatccaagggaagtctaaagcagcgtattcaaaatattttcacctg
ttacctgcggatatgatggcggttatcactatgcataagttgatgggattgctgatgaca
gggggtgaacatggtaatgtaagagtggtacaagctgcgcttgctattggtgatgcaatt
gagcaggaggttagaatacacaagtttttagagaaaacagagaagcataaagccgagaaa
gataggaacataaaagacggagaacatgccactctagaacaaaagaaactacacaagaaa
gtcacgagtctaatgaaaaaacagaagttacgtgcagtgaaccagatagtgagaagtcaa
gacgattcaaagccctggggccaagatgctaaagcaaaggttggaagccgtttaattgag
ttcctcctacagacagcttatatacagtctcctgctgatcagttagcagttgatccacct
gacattcgacctgcctttatacatagtactagaactttagccaaagaaacaaaaagtgcg
agcagaagatatggtgttatccaatgtgatgaactggttttcaaaggacttgaaagaact
gccagacacatggtgataccttacatgccaatgttggtgcctcctgtgaagtggacaggt
tatgacaagggtggacacctctatctgccttcgtatgtcatgcggacacatggagcaaga
caacaacgtgaagcagtaaagagagcctcccggaatcagttgcaaccagtttttgaggct
cttgatactctgggaagtaccaaatggaggataaacaaaagggtactttctgttgttgat
agaatatgggctggtggtggtcgtctggctgatttggtggaccgtgatgatgtccctttg
ccagaagaaccagatacggaagatgaggcagtatgcacgaagtggaggtggaaagtaaag
tctgtcaagaaagagaacagagaaagacactcacaacgatgtgacatcgagctgaaactt
gctgtagcgcatagaatgaaagatgaagaaggtttcttctacccgcacaatgttgatttc
cgaggtcgcgcataccccatgcatccacatttaaaccatctcggttctgatatctgtcgg
ggtgtcctggagtttgcagcaggtcgtcctcttggagaatcaggcttgcgctggttgaag
atacaccttgcaaatttatttgctggtggtgtggataaattatctcttgatggtagaata
gcttttactgaaagtcacttggatgatatatttgattctgctgacaaaccgctcgaagga
aggcgctggtggttgaatgcagaggatccttttcagtgcctggccgtatgcattaatctt
agtgaagctgtcagaagttcatccccagagacagttatttctcatgttcctgtacaccag
gatggttcctgcaatggtttacaacattatgctgccctcggaagagataagttgggagct
gctgcagtcaatttggttgctggagaaaaacctgctgatgtttactctggcatagcagct
agagtccttgatattatgaatagagatgcacaaagagatcctgcagaatttccagatgct
gttcgtgcaagggttttagttaatcaggttgacaggaaattggtgaagcagacagtgatg
acatcagtctatggggtcacttacattggggctcgtgatcaaataaagaggaggttaaag
gagcgtggtgcaattgctgatgatactgagctatttggtgctgcttgctatgccgcaaaa
gtcacattaactgcattgggggagatgtttgaagcggcacgcagcatcatgacttggctt
ggggaatgtgctaagataattgcttctgaaaatgaaccagtcagatggacaactcctctt
gggcttccagttgttcagccttaccgcaaaattggaagacattttattaagacttctctc
caaattttgactttgcaacgggaaacagaaaaggtaatggtcaagaggcaaaggacagct
tttccgccaaatttcattcactcccttgatggttcacatatgatgatgactgcagttgca
tgcagaagggctggcttaaactttgcaggtgttcatgactcgtattggacgcatgcgtgc
gatgttgataagttgaacaggatattgagagaaaagtttgtagagctttatgaaacgccg
attctagagaaattgttggagggcttccaagtttcctatcctacactgtcattcccccct
ttgcctgaacgtggggactttgatttgagagatgtcatagaatctccctatttcttcaat
tga
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