Solanum pennellii: 107008795
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Entry
107008795 CDS
T04130
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X2
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
spen
Solanum pennellii
Pathway
spen00500
Starch and sucrose metabolism
spen01100
Metabolic pathways
spen01110
Biosynthesis of secondary metabolites
Module
spen_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
107008795
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
spen01003
]
107008795
Enzymes [BR:
spen01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
107008795
Glycosyltransferases [BR:
spen01003
]
Polysaccharide
Storage polysaccharide
107008795
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_trans_4_4
Uds1
Motif
Other DBs
NCBI-GeneID:
107008795
NCBI-ProteinID:
XP_015063464
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Position
2:57333223..57348962
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AA seq
748 aa
AA seq
DB search
MITEMLSISTIGKAPPPRTNFSPSNGKPPRASCFICCVRKNAESNGSSGGLLQLQLGNQS
SDENVPQMRSGVRKLFREAQQNILYLNKQRILAMEELDRVKRERRSLLDRIEQLERIKLM
YTRKDKFSISAELLLRIDSMVLTSLIGSKEASEFRRLVMDSIGSIADYFSQIMHKQDTEL
LVELRHFPRKSRKSGNHIIHICTEMAPVASVGSLAPYVTGLSRALQRKGNLVEVILPKYA
SLNLNEVHGLREVEAEFHSYFNGQLHGNRLWTGVVCGIGVTFIEPLYYSAFFGCENIYGY
SNDFERFTYFSRASLDYIVKAGKQPDVLHIHNWETSIVGPLFWDVFVKQGLGGTRIMLTC
QSFESQCVEQPEKLALCGLDPYGLHCSDRLQDNNNSHLVNVLKAGVVYSNNVIIMSSMQT
KGQIIHARSHGLEPTLTIHKYVLFNILQLGSVWILILWQVLFFAKGSRDAFACCNRLVVS
QDCFSSGVYGAAFHLLIQLDCRDKLVVAPQGFNSSAWDPSVDKFLPQNYSADNMKGKSVC
KVSLQQHLGLQEKASIVLVGCIFSDISNIELENLKTLLWMASRRGVQFVFMSSAQTPGLN
SALEYFEEEFKDENMRFLNKYDESLAHLVLAGSDIMLCPSFDDTVLQIPLKAMRYGAMPI
LLDFTDSKYGHFVDGDVEGTEFSRYIKDTFSNMPLNQAIDELKNNPSKWDKKILDAMIKD
FSWDAECCDIHISAYTAIKNLPNIESYI
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgatcacggagatgctttccatttcaaccatcggcaaagctcctcctcctcggaccaac
ttctctccgtctaatggcaaacctcctcgagcttcctgcttcatttgttgcgttaggaag
aatgcagagagtaatggctcatctggtggacttttgcagttgcagttgggaaaccagagt
agtgatgagaatgttcctcaaatgagaagtggcgttaggaaacttttcagagaagctcaa
cagaatatcttgtacttgaacaaacaacgcatcttggcaatggaagagcttgatagagta
aaaagagagagacgttcattgctcgatagaatcgagcaactagagaggataaagctgatg
tatacaagaaaagataagttctcaatcagcgctgagttactactaaggatagactctatg
gttcttaccagtttgattggcagcaaggaggcatcagagtttagaaggctggtcatggat
tcgataggtagtatagctgattatttctcacagataatgcataaacaggacactgagctt
ctggtagagctgcgtcacttccccaggaaaagtagaaagtcgggaaaccacataatccac
atttgtactgaaatggcaccagtggcatcagttggatccttggcaccatatgtaaccgga
ttatctcgtgccttgcaaagaaagggaaatctggttgaggttatcttacccaagtatgct
agcctaaatttaaatgaagttcatggattacgagaagttgaagcggagttccattcatac
tttaatggtcaactgcatggaaacagactctggactggggttgtctgtggcattggagtg
actttcatagaacctctctactattcagcatttttcggctgtgagaacatatatggctac
tcaaatgattttgaacgattcacctacttctctcgtgcttcattggattatatagttaaa
gcaggaaagcagccagatgtgcttcatatacacaactgggaaacatctattgttggtcca
ctgttttgggatgtttttgtaaagcagggacttggaggtaccagaataatgttgacatgt
caaagctttgagtctcagtgtgtagagcaacctgaaaagttggccctatgtgggcttgat
ccttatggactacattgttctgaccgtctgcaagataacaacaactcccatcttgtcaat
gttttgaaggctggagttgtatactccaacaatgttatcataatgtcatccatgcaaaca
aaagggcagataattcatgctaggagtcatggtcttgagcccaccttaaccatacacaag
tatgtgctcttcaacattttacaattaggctcagtatggattctgattctttggcaagtt
ctattctttgctaaaggctccagagatgcttttgcttgctgcaacagattagtagtctct
caggattgtttctcctctggtgtttatggagctgcttttcatttgttaatacaacttgat
tgtagggacaagttagtagttgctcctcaaggattcaacagttcagcttgggatccctca
gtagataagtttcttccacaaaactatagtgcagataatatgaaggggaaatctgtctgc
aaagtctcgttgcagcagcatttggggttgcaggagaaagcatccattgttcttgtagga
tgcatcttctcagacatctctaatattgaactggagaacctcaagacacttctttggatg
gcttctaggagaggtgttcagtttgtcttcatgagctcggctcaaactcctggtttgaat
tcggcattggaatattttgaggaggaattcaaggatgaaaacatgagattccttaacaaa
tatgatgaatctttagcacatttagtacttgcgggatctgacatcatgctatgcccttct
tttgatgatacagtactccaaataccactcaaggccatgagatatggagctatgcctatt
ctactggattttaccgacagtaaatacgggcactttgtggatggtgatgttgagggcacc
gaattctctcgttatatcaaagataccttctccaatatgcccctgaaccaagcaattgat
gaacttaagaacaacccatcaaaatgggacaagaagatcctcgatgccatgataaaggac
ttttcgtgggatgcagagtgctgcgacattcatatctctgcatatacagcgataaaaaac
ttgcccaacattgaaagctacatatag
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