KEGG   Solanum pennellii: 107009082
Entry
107009082         CDS       T04130                                 
Name
(RefSeq) exonuclease 1
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
spen  Solanum pennellii
Pathway
spen03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    107009082
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spen03032]
    107009082
   03400 DNA repair and recombination proteins [BR:spen03400]
    107009082
DNA replication proteins [BR:spen03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    107009082
DNA repair and recombination proteins [BR:spen03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     107009082
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 MIT TPR_1 5_3_exonuc TPR_8 TPR_2 HHH_5 Methyltransf_14
Other DBs
NCBI-GeneID: 107009082
NCBI-ProteinID: XP_015063835
LinkDB
Position
2:44280090..44289252
AA seq 751 aa
MGIQGLLPLLKSIMLPINIKDLNGCSVAVDTYSWLHKGALSCSKELCKGIPTTKHIDYCM
HRVNLLRHHGVKPILVFDGGPLPMKIEQENKRGRSRKENLSRAIEHENNGNMTAAYECYQ
KAVDISPSVAHDLIQVLKRENVCYVVAPYEADAQMTFLAISKQVDAVITEDSDLIAFGCP
RIIYKMDKFGQGLEFRYSKLEQNKELSLTGFTKQMLLEMCILSGCDYLQSLPGMGLKKAH
ALIKKFKSYDKVIKHLRYNTAAVSPMYEESFRKAIMTFQHQRVYDLMTEDLVHLSELSDL
GSQDLDFLGPLIPTEVAQGIAKGDIDPFTMMPFQKECNTAELVDSRSYELNDFKVEGERR
KLDLPAQKNLLTNYFCTASLEAKQKFRAPRTSPILPNSEVGVSSAWADSRKGADSYKFGS
LSMSSPDPLVDDDIHLKASMCLESKCQGILLEEEIENGLGLQSVPLQHSICKPCITLHKE
HALDLSENKIRATKKKVIVRSSYFLKNNKKEDIQDDKSEINVVANDKSHSSIRENDYDSM
SDAMNGAVVAAVKIAIPQSSFFLSNLSAQNVPGGDAEQKENKRGIVRSSYFQKNLANENS
QGNLDVAAEMASGDDCSERRLKKRKVTFIDTVQTDNASDECLEADTSGSQGDFNSNLDDS
TKETKDGQRKFGSNISHLGHYSQISEKSMDNFVSVISSFRYTSNGSRASGLRAPLKDIKN
TSTNRSASNMDLSKFVYKPTKQKQLSACRKV
NT seq 2256 nt   +upstreamnt  +downstreamnt
atgggtatacaaggccttttgccccttttgaaatcgataatgttaccaataaacatcaaa
gacttgaatggctgcagtgttgctgttgatacatattcatggctgcataaaggtgccctt
tcttgcagcaaagagctctgtaaagggattcctactaccaagcatattgattattgcatg
cacagagtgaatttgttgcgccatcatggtgtcaaacctattctcgtgtttgatggaggt
cccttaccaatgaagattgaacaggagaacaagcggggaaggtctagaaaggaaaacctt
tctcgtgcaatagagcatgaaaataatggaaatatgactgctgcttatgagtgctatcag
aaggctgttgatatatcaccttcagtggctcacgatctaatacaggtcctaaagcgggaa
aatgtatgttatgtagtggctccttatgaagcagatgcccaaatgacctttttggccatc
agcaaacaggttgatgctgttataactgaggactcagatttaatagcatttggttgtcct
aggatcatttacaaaatggataagtttgggcaaggtcttgagtttcggtactccaagctg
gaacaaaataaggaactgagtttaacaggtttcacaaagcagatgcttcttgagatgtgc
atcttgagtggttgtgactatttgcagtccttgcctggaatggggctcaaaaaagctcat
gcacttataaaaaagttcaaaagttatgacaaagtcattaagcacttgaggtacaatact
gctgcagtttctcctatgtatgaagaatctttcagaaaagcaattatgaccttccagcat
caacgagtttatgatctcatgactgaagatctagttcatttgtccgagctctctgatctt
ggtagtcaagatctagatttcctaggcccgctgatacctacagaagtagctcaaggaata
gcaaaaggtgacattgatcctttcactatgatgccatttcagaaagaatgcaacaccgct
gaactggtggatagcagaagttatgaactgaatgacttcaaagtggaaggtgaaaggagg
aagcttgatttgcctgcacagaaaaatctcctaaccaactacttctgcactgcttctctt
gaagcaaaacagaaatttagggccccaaggactagccctatccttccgaattcagaggtt
ggagtttcaagcgcttgggcagacagtagaaagggagccgattcgtataaattcgggagc
ttgtcaatgtcctcccctgatcctctggtggatgatgatattcacttgaaagcttccatg
tgtttggagtcaaaatgtcaaggaattctgttagaggaagaaattgaaaatggcctagga
ctacaatctgttccactacagcattcaatatgtaaaccctgcatcacattgcataaggag
catgctctggatttaagtgagaacaagatacgagcaacaaaaaaaaaagtgatagtgagg
agcagctattttttgaagaataacaagaaggaagatattcaagatgataagagtgagata
aatgtggttgccaatgataaatctcatagcagcattcgggagaatgattatgattctatg
tcagatgcaatgaacggagcagtcgtagcagcagttaaaattgccattccacaaagttca
ttttttctgtccaatttatctgcccaaaatgttcctggaggtgatgctgaacagaaagag
aacaaaagaggaatagttaggagttcttattttcagaagaacttggcaaatgaaaattct
cagggcaacttggatgttgcagctgagatggcttcaggagatgactgctctgaaaggaga
ttaaagaaaaggaaggttaccttcattgacactgttcaaactgataatgcaagtgatgaa
tgtttagaggctgacacatctggcagtcaaggcgacttcaactccaacctagatgattca
actaaggagacaaaggatggacaaaggaaattcggttccaacatatctcatttaggacat
tattctcaaatatcagagaaatcaatggacaattttgtttcggtcatatcttcatttaga
tacacctcaaatggttctcgagccagtgggctccgagcccctctaaaagatattaagaat
accagcactaataggtccgctagtaacatggatctaagcaagtttgtgtacaagccaaca
aagcaaaagcaattatcagcatgtcgtaaggtctaa

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