Solanum pennellii: 107009224
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Entry
107009224 CDS
T04130
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
spen
Solanum pennellii
Pathway
spen03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107009224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107009224
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
107009224
Prokaryotic type
Archaeal type
TFB
107009224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
DUF2387
Motif
Other DBs
NCBI-GeneID:
107009224
NCBI-ProteinID:
XP_015064013
LinkDB
All DBs
Position
2:complement(52324890..52328766)
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AA seq
425 aa
AA seq
DB search
MRCPYCSAEQGRCTSSTSGRPITECTSCGRVVEERLTQSHHLFHTRAQDSPLCLATSDLP
TLPISATNDDEDPFEPTGFITTFSTWSLEPYPVFAQSSISFAGHLAELERVLEMTSTSSS
SSSSSVVVENLRAYLQIIDVASILRLDSDISDHAFQLFRDCSSATCLRNRSVEALATAAL
VHAIREAQEPRTLQEISVAANLPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLL
QLNKSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTE
VTLRKVYKELLENWDDLLPSSYKPVVPPEKAFPSATIATGRSSTPRVDLVEGTSSERDKP
VKPVDSLDVSPQIRGKEDSDSKDNINTTQLSWPPPFWKPQAPAEGGVKSATDKSQNATDE
MEIDL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgtccgtactgctcggcggagcaagggcggtgtaccagcagcaccagtggcaga
ccgataaccgagtgcacatcctgcggccgggtagtggaggagcgattaacccaatcccac
catctttttcatacccgtgcccaagattctcctctgtgcctggctacttctgatctcccc
actcttcccatctccgccactaacgacgatgaagacccatttgaacccactggtttcatc
accactttctctacttggtctctcgaaccctacccagtatttgcccaatcctccatttca
ttcgccggtcaccttgctgagctcgagcgggtcctcgaaatgacgtcaacttcctccagt
tcgtcctcttcttctgtagtggtggaaaatctccgggcttatttgcagattattgatgtg
gcttctattctgcgactggattctgatatttcggaccacgcgtttcagctcttcagggat
tgttcttcagcaacttgcttaaggaatcggagtgttgaagcgcttgctactgctgctctt
gtgcacgctatcagggaagcccaagagcctagaactctccaggaaatatcagttgcagcc
aatttacctcagaaggaaatcgggaagtacataaagattcttggagaagcgttacaactc
agtcaacctatcaatagtaattctatatcagtccatatgccaaggttttgtacactcctt
cagctgaataaatctgctcaggagctggcgactcacattggtgaagtaatcatcaataaa
tgcttttgcactagaaggaatccaattagcatctctgctgctgctatatatttggcatgt
caactagaggacaagcggaagacccaggctgaaatatgtaaggtgactggactaactgag
gttactcttcgtaaggtgtacaaggagcttttggagaactgggatgatctcctaccatca
agttataaaccagttgttccaccagagaaggcttttccttcagctaccattgctacaggc
cgttcatcaacacctagagttgatttagttgagggaacttcatctgagagggacaagcca
gttaaaccagtcgactcattagatgtatctcctcagatcagaggcaaggaggactccgac
agcaaagataatattaatacaactcaattatcttggccaccaccattttggaagcctcaa
gctcctgctgaaggtggtgttaaatcagctacagataagagtcagaatgctactgatgaa
atggagattgatttataa
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