Solanum pennellii: 107009248
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Entry
107009248 CDS
T04130
Name
(RefSeq) denticleless protein homolog A
KO
K11790
denticleless
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107009248
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107009248
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
MIOS_WD40
Beta-prop_SPT8
Beta-prop_WDR11_1st
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
107009248
NCBI-ProteinID:
XP_015064038
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Position
2:53258926..53264157
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AA seq
514 aa
AA seq
DB search
MDAFKHQSFFQDIKSREVHGYRVKRRPYISHELSNFNQIGAVAVDHNGFTPPPMALSFCK
TSKNSHIVAVTDEVGYLSLFNTRLQFPSSFTHLQNAEKAKVSEWVAHDNAIFDVCWIKED
TNILTASGDQSIKVWDAQAKQCVRVLAGHTGSVKSICPHPTNHDIIVSGSRDGSFALWDL
RCSDSSSENLFIPSIATVHEAHISPCQRRTRRGKASSVSITSILYLKDELSIASAGAVDS
VIKFWDTRNLKCPVVQACPNPDVSTQKVQRYHGVSSLSQDLNGAFISASCMDSRIYLYNV
LQAEKGPVKTFKGCKIESFFVKAAISPDAAHILSGSSDGNGYLWQVNKPLEDPIMLKGHD
GEVTALDWCTSETGKVATSSDDFTVRFWNIHNSCYSNTRSPSSIRRRVTALSCMQRRKLF
SDEKPASIKNFSAGCDSNLTCHQDLPDPITVPEMSTPISKKRKTLPSVEPQENFEKTPEA
AKRSPSSVLNPPSSLRKTIRDYFLVTPPSGLHSK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgttcaagcatcagtcgttcttccaagatatcaaatcaagggaggttcatgga
tacagagtgaaaagacgaccttacatcagtcacgaattgtctaatttcaatcaaattgga
gccgtagcagttgaccacaacgggttcacgccacctccaatggccctatctttctgcaag
acaagtaaaaactcacatattgttgctgtcactgacgaggttggctaccttagcttgttt
aacacccggttgcaatttccttcttcttttactcacctgcaaaacgcagaaaaagctaag
gtatcagaatgggttgctcatgataatgccatatttgatgtatgttggatcaaggaagat
accaatatcttaacagcttcaggtgatcaaagtataaaggtatgggatgcacaagcaaag
caatgtgtgagagtactagcgggtcacactggaagtgtaaaatccatttgtcctcatcct
acaaatcatgatattattgtttctggttcaagagatgggtcatttgcactctgggacttg
aggtgctccgacagtagcagtgaaaaccttttcataccgtcaattgctaccgtccatgag
gctcacatttctccctgtcagaggcggactagacgtggaaaggcttcctctgtgagcatt
acatctatactttaccttaaagatgagctttccatagctagtgctggagcagttgacagt
gtcataaagttctgggacaccaggaatctcaaatgtcctgttgttcaggcatgccctaat
cctgatgtatcaactcagaaggtacaacgatatcatggagtatctagtttgtctcaagat
ttaaatggagcatttatttctgcatcatgcatggacagcagaatctacctctacaatgta
cttcaggcagaaaaagggcctgttaaaactttcaaaggatgcaaaatagaatcatttttt
gtcaaggcagcaataagtcctgatgcagctcatattcttagtggttccagtgatggaaat
ggctacttatggcaggtaaacaaacctcttgaagatccaattatgttgaaaggccatgat
ggagaagttacagcactagattggtgcacatcagaaacaggcaaagttgctacatcatca
gatgatttcacggtgcggttttggaacatccacaacagttgttactcaaacactcgatct
ccatcatccattcgaaggagagtaacagcactttcatgtatgcaacgccggaagctgttt
tcagatgaaaaaccagccagcatcaagaatttctctgctggctgtgactcaaacttgaca
tgtcatcaagacttgcctgatcctatcacagtccctgaaatgagcactccaatatcaaag
aagagaaaaactttaccaagtgttgaacctcaagaaaactttgagaaaaccccagaagct
gcaaagagaagtccttcatctgttctgaatcccccttcctctttgaggaagacaatcaga
gattactttttagtcacccctccttcaggcttgcacagtaaatga
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