KEGG   Solanum pennellii: 107009248
Entry
107009248         CDS       T04130                                 
Name
(RefSeq) denticleless protein homolog A
  KO
K11790  denticleless
Organism
spen  Solanum pennellii
Brite
KEGG Orthology (KO) [BR:spen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:spen04121]
    107009248
Ubiquitin system [BR:spen04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107009248
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd MIOS_WD40 Beta-prop_SPT8 Beta-prop_WDR11_1st WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_IFT140_1st WD_LRWD1 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 107009248
NCBI-ProteinID: XP_015064038
LinkDB
Position
2:53258926..53264157
AA seq 514 aa
MDAFKHQSFFQDIKSREVHGYRVKRRPYISHELSNFNQIGAVAVDHNGFTPPPMALSFCK
TSKNSHIVAVTDEVGYLSLFNTRLQFPSSFTHLQNAEKAKVSEWVAHDNAIFDVCWIKED
TNILTASGDQSIKVWDAQAKQCVRVLAGHTGSVKSICPHPTNHDIIVSGSRDGSFALWDL
RCSDSSSENLFIPSIATVHEAHISPCQRRTRRGKASSVSITSILYLKDELSIASAGAVDS
VIKFWDTRNLKCPVVQACPNPDVSTQKVQRYHGVSSLSQDLNGAFISASCMDSRIYLYNV
LQAEKGPVKTFKGCKIESFFVKAAISPDAAHILSGSSDGNGYLWQVNKPLEDPIMLKGHD
GEVTALDWCTSETGKVATSSDDFTVRFWNIHNSCYSNTRSPSSIRRRVTALSCMQRRKLF
SDEKPASIKNFSAGCDSNLTCHQDLPDPITVPEMSTPISKKRKTLPSVEPQENFEKTPEA
AKRSPSSVLNPPSSLRKTIRDYFLVTPPSGLHSK
NT seq 1545 nt   +upstreamnt  +downstreamnt
atggacgcgttcaagcatcagtcgttcttccaagatatcaaatcaagggaggttcatgga
tacagagtgaaaagacgaccttacatcagtcacgaattgtctaatttcaatcaaattgga
gccgtagcagttgaccacaacgggttcacgccacctccaatggccctatctttctgcaag
acaagtaaaaactcacatattgttgctgtcactgacgaggttggctaccttagcttgttt
aacacccggttgcaatttccttcttcttttactcacctgcaaaacgcagaaaaagctaag
gtatcagaatgggttgctcatgataatgccatatttgatgtatgttggatcaaggaagat
accaatatcttaacagcttcaggtgatcaaagtataaaggtatgggatgcacaagcaaag
caatgtgtgagagtactagcgggtcacactggaagtgtaaaatccatttgtcctcatcct
acaaatcatgatattattgtttctggttcaagagatgggtcatttgcactctgggacttg
aggtgctccgacagtagcagtgaaaaccttttcataccgtcaattgctaccgtccatgag
gctcacatttctccctgtcagaggcggactagacgtggaaaggcttcctctgtgagcatt
acatctatactttaccttaaagatgagctttccatagctagtgctggagcagttgacagt
gtcataaagttctgggacaccaggaatctcaaatgtcctgttgttcaggcatgccctaat
cctgatgtatcaactcagaaggtacaacgatatcatggagtatctagtttgtctcaagat
ttaaatggagcatttatttctgcatcatgcatggacagcagaatctacctctacaatgta
cttcaggcagaaaaagggcctgttaaaactttcaaaggatgcaaaatagaatcatttttt
gtcaaggcagcaataagtcctgatgcagctcatattcttagtggttccagtgatggaaat
ggctacttatggcaggtaaacaaacctcttgaagatccaattatgttgaaaggccatgat
ggagaagttacagcactagattggtgcacatcagaaacaggcaaagttgctacatcatca
gatgatttcacggtgcggttttggaacatccacaacagttgttactcaaacactcgatct
ccatcatccattcgaaggagagtaacagcactttcatgtatgcaacgccggaagctgttt
tcagatgaaaaaccagccagcatcaagaatttctctgctggctgtgactcaaacttgaca
tgtcatcaagacttgcctgatcctatcacagtccctgaaatgagcactccaatatcaaag
aagagaaaaactttaccaagtgttgaacctcaagaaaactttgagaaaaccccagaagct
gcaaagagaagtccttcatctgttctgaatcccccttcctctttgaggaagacaatcaga
gattactttttagtcacccctccttcaggcttgcacagtaaatga

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